STRINGSTRING
F6HH36_VITVI F6HH36_VITVI F6HHX2_VITVI F6HHX2_VITVI F6HJ24_VITVI F6HJ24_VITVI F6HN65_VITVI F6HN65_VITVI F6HTG1_VITVI F6HTG1_VITVI F6HTG2_VITVI F6HTG2_VITVI F6HVQ7_VITVI F6HVQ7_VITVI F6HWS4_VITVI F6HWS4_VITVI F6HX23_VITVI F6HX23_VITVI F6HZ93_VITVI F6HZ93_VITVI F6I090_VITVI F6I090_VITVI F6I1E4_VITVI F6I1E4_VITVI F6I2K0_VITVI F6I2K0_VITVI F6I3Q6_VITVI F6I3Q6_VITVI F6I3Q8_VITVI F6I3Q8_VITVI F6I3Q9_VITVI F6I3Q9_VITVI F6I4C2_VITVI F6I4C2_VITVI F6I4S0_VITVI F6I4S0_VITVI F6I4Y4_VITVI F6I4Y4_VITVI F6I4Z4_VITVI F6I4Z4_VITVI VITISV_040760 VITISV_040760 VITISV_023269 VITISV_023269 VITISV_002501 VITISV_002501 D7SJV3_VITVI D7SJV3_VITVI D7SN66_VITVI D7SN66_VITVI D7SP01_VITVI D7SP01_VITVI D7SPE0_VITVI D7SPE0_VITVI D7SS78_VITVI D7SS78_VITVI D7STK8_VITVI D7STK8_VITVI D7SUE8_VITVI D7SUE8_VITVI D7SYS4_VITVI D7SYS4_VITVI D7T0B9_VITVI D7T0B9_VITVI D7T6N6_VITVI D7T6N6_VITVI D7T9L8_VITVI D7T9L8_VITVI D7TBD6_VITVI D7TBD6_VITVI D7TCU0_VITVI D7TCU0_VITVI D7TDE3_VITVI D7TDE3_VITVI D7TFY3_VITVI D7TFY3_VITVI D7TH86_VITVI D7TH86_VITVI D7TJZ9_VITVI D7TJZ9_VITVI D7TKQ8_VITVI D7TKQ8_VITVI D7TLS9_VITVI D7TLS9_VITVI D7TNP9_VITVI D7TNP9_VITVI D7TQ06_VITVI D7TQ06_VITVI D7TU01_VITVI D7TU01_VITVI D7TV41_VITVI D7TV41_VITVI D7TZW4_VITVI D7TZW4_VITVI D7U0L4_VITVI D7U0L4_VITVI D7U116_VITVI D7U116_VITVI D7U2H1_VITVI D7U2H1_VITVI D7U2U3_VITVI D7U2U3_VITVI D7UA59_VITVI D7UA59_VITVI D7UAK0_VITVI D7UAK0_VITVI D7UAZ2_VITVI D7UAZ2_VITVI E0CQ54_VITVI E0CQ54_VITVI E0CT66_VITVI E0CT66_VITVI E0CTP8_VITVI E0CTP8_VITVI F6GTN6_VITVI F6GTN6_VITVI F6GV17_VITVI F6GV17_VITVI F6GXI4_VITVI F6GXI4_VITVI F6GYS7_VITVI F6GYS7_VITVI F6GYS8_VITVI F6GYS8_VITVI F6GZQ1_VITVI F6GZQ1_VITVI F6H1J1_VITVI F6H1J1_VITVI F6H1Z6_VITVI F6H1Z6_VITVI F6H4R6_VITVI F6H4R6_VITVI F6H6L3_VITVI F6H6L3_VITVI F6H737_VITVI F6H737_VITVI F6H7X1_VITVI F6H7X1_VITVI F6H8R2_VITVI F6H8R2_VITVI F6HBV4_VITVI F6HBV4_VITVI F6HCE0_VITVI F6HCE0_VITVI F6HCN1_VITVI F6HCN1_VITVI F6HDY2_VITVI F6HDY2_VITVI F6HFZ9_VITVI F6HFZ9_VITVI VITISV_005429 VITISV_005429
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
F6HH36_VITVICoatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (906 aa)
F6HHX2_VITVIWD_REPEATS_REGION domain-containing protein. (1099 aa)
F6HJ24_VITVIAP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family. (962 aa)
F6HN65_VITVIUncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (170 aa)
F6HTG1_VITVIUncharacterized protein. (53 aa)
F6HTG2_VITVIUncharacterized protein. (64 aa)
F6HVQ7_VITVIWD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (301 aa)
F6HWS4_VITVIClathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (375 aa)
F6HX23_VITVICoatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (983 aa)
F6HZ93_VITVIUncharacterized protein. (163 aa)
F6I090_VITVIUncharacterized protein. (178 aa)
F6I1E4_VITVIProtein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (781 aa)
F6I2K0_VITVIUncharacterized protein. (108 aa)
F6I3Q6_VITVIF-box domain-containing protein. (653 aa)
F6I3Q8_VITVIUncharacterized protein. (584 aa)
F6I3Q9_VITVIENTH domain-containing protein. (507 aa)
F6I4C2_VITVIProtein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (771 aa)
F6I4S0_VITVIUncharacterized protein. (237 aa)
F6I4Y4_VITVIUncharacterized protein. (125 aa)
F6I4Z4_VITVIUncharacterized protein. (74 aa)
VITISV_040760WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (301 aa)
VITISV_023269Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (948 aa)
VITISV_002501DUF1681 domain-containing protein. (278 aa)
D7SJV3_VITVIClathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1705 aa)
D7SN66_VITVIAP-2 complex subunit alpha; Subunit of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. (1015 aa)
D7SP01_VITVIAP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (172 aa)
D7SPE0_VITVIAP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (165 aa)
D7SS78_VITVIWD_REPEATS_REGION domain-containing protein. (322 aa)
D7STK8_VITVIENTH domain-containing protein. (608 aa)
D7SUE8_VITVIBeta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules. (844 aa)
D7SYS4_VITVIMHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (428 aa)
D7T0B9_VITVIUncharacterized protein. (569 aa)
D7T6N6_VITVIMHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (627 aa)
D7T9L8_VITVICoatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. (561 aa)
D7TBD6_VITVIAP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (136 aa)
D7TCU0_VITVIUncharacterized protein. (744 aa)
D7TDE3_VITVIAP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (178 aa)
D7TFY3_VITVIAdaptin_N domain-containing protein. (145 aa)
D7TH86_VITVIUncharacterized protein. (114 aa)
D7TJZ9_VITVICoatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (200 aa)
D7TKQ8_VITVICoatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family. (289 aa)
D7TLS9_VITVIAP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. (1140 aa)
D7TNP9_VITVIAP-1 complex subunit gamma. (878 aa)
D7TQ06_VITVICoatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (887 aa)
D7TU01_VITVIMHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (438 aa)
D7TV41_VITVIBeta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules. (920 aa)
D7TZW4_VITVICoatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (183 aa)
D7U0L4_VITVIWD_REPEATS_REGION domain-containing protein. (243 aa)
D7U116_VITVICoatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (147 aa)
D7U2H1_VITVIUncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (193 aa)
D7U2U3_VITVIProtein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (874 aa)
D7UA59_VITVIMHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (415 aa)
D7UAK0_VITVIWD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (305 aa)
D7UAZ2_VITVIUncharacterized protein. (71 aa)
E0CQ54_VITVIAP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (188 aa)
E0CT66_VITVIUncharacterized protein. (1124 aa)
E0CTP8_VITVIDUF1681 domain-containing protein. (287 aa)
F6GTN6_VITVIAP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which seems to be clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to the vacuole. It also function in maintaining the identity of lytic vacuoles and in regulating the transition between storage and lytic vacuoles. (959 aa)
F6GV17_VITVIENTH domain-containing protein. (337 aa)
F6GXI4_VITVIUncharacterized protein. (296 aa)
F6GYS7_VITVIWD_REPEATS_REGION domain-containing protein. (581 aa)
F6GYS8_VITVIWD_REPEATS_REGION domain-containing protein. (322 aa)
F6GZQ1_VITVICoatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. (1217 aa)
F6H1J1_VITVIMHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (497 aa)
F6H1Z6_VITVIUncharacterized protein. (1052 aa)
F6H4R6_VITVIUncharacterized protein. (307 aa)
F6H6L3_VITVIAP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (177 aa)
F6H737_VITVIUncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (193 aa)
F6H7X1_VITVIProtein kinase domain-containing protein. (546 aa)
F6H8R2_VITVIENTH domain-containing protein. (325 aa)
F6HBV4_VITVICoatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (949 aa)
F6HCE0_VITVIClathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (319 aa)
F6HCN1_VITVIUncharacterized protein. (116 aa)
F6HDY2_VITVIUncharacterized protein. (1133 aa)
F6HFZ9_VITVIUncharacterized protein. (651 aa)
VITISV_005429Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1704 aa)
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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