16 items (Vitis vinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6H6V6_VITVI	Uncharacterized protein. (562 aa)
	D7SJ21_VITVI	Uncharacterized protein. (470 aa)
	D7SJ22_VITVI	Uncharacterized protein. (469 aa)
	D7SJ23_VITVI	Uncharacterized protein. (469 aa)
	D7SN42_VITVI	Uncharacterized protein. (172 aa)
	CRY1	Photolyase/cryptochrome alpha/beta domain-containing protein. (691 aa)
	F6GSN0_VITVI	C2 domain-containing protein. (181 aa)
	F6H4E0_VITVI	Uncharacterized protein. (619 aa)
	F6H6V3_VITVI	Uncharacterized protein. (565 aa)
	F6HRR9_VITVI	Exocyst subunit Exo70 family protein; Component of the exocyst complex. (622 aa)
	F6HET5_VITVI	Uncharacterized protein. (426 aa)
	F6HKI5_VITVI	Uncharacterized protein. (166 aa)
	F6HL68_VITVI	Uncharacterized protein. (266 aa)
	F6HV26_VITVI	Uncharacterized protein. (1156 aa)
	F6HV25_VITVI	Uncharacterized protein. (500 aa)
	F6HV24_VITVI	Uncharacterized protein. (602 aa)

Your Current Organism:

Vitis vinifera

NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D7SJ23_VITVI	F6H4E0_VITVI	D7SJ23	F6H4E0	Uncharacterized protein.	Uncharacterized protein.	0.665
F6H4E0_VITVI	D7SJ23_VITVI	F6H4E0	D7SJ23	Uncharacterized protein.	Uncharacterized protein.	0.665
F6H4E0_VITVI	F6H6V3_VITVI	F6H4E0	F6H6V3	Uncharacterized protein.	Uncharacterized protein.	0.443
F6H4E0_VITVI	F6H6V6_VITVI	F6H4E0	F6H6V6	Uncharacterized protein.	Uncharacterized protein.	0.410
F6H4E0_VITVI	F6HV24_VITVI	F6H4E0	F6HV24	Uncharacterized protein.	Uncharacterized protein.	0.410
F6H4E0_VITVI	F6HV26_VITVI	F6H4E0	F6HV26	Uncharacterized protein.	Uncharacterized protein.	0.412
F6H6V3_VITVI	F6H4E0_VITVI	F6H6V3	F6H4E0	Uncharacterized protein.	Uncharacterized protein.	0.443
F6H6V6_VITVI	F6H4E0_VITVI	F6H6V6	F6H4E0	Uncharacterized protein.	Uncharacterized protein.	0.410
F6HV24_VITVI	F6H4E0_VITVI	F6HV24	F6H4E0	Uncharacterized protein.	Uncharacterized protein.	0.410
F6HV25_VITVI	F6HV26_VITVI	F6HV25	F6HV26	Uncharacterized protein.	Uncharacterized protein.	0.429
F6HV26_VITVI	F6H4E0_VITVI	F6HV26	F6H4E0	Uncharacterized protein.	Uncharacterized protein.	0.412
F6HV26_VITVI	F6HV25_VITVI	F6HV26	F6HV25	Uncharacterized protein.	Uncharacterized protein.	0.429