24 items (Vitis vinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

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protein homology

Your Input:
	D7SMM8_VITVI	S4 RNA-binding domain-containing protein. (182 aa)
	D7SMJ6_VITVI	RRP7 domain-containing protein. (313 aa)
	VITISV_041221	Brix domain-containing protein. (293 aa)
	D7THK7_VITVI	WD_REPEATS_REGION domain-containing protein. (905 aa)
	D7T7H3_VITVI	Uncharacterized protein. (191 aa)
	D7T591_VITVI	Uncharacterized protein. (235 aa)
	F6I3W1_VITVI	S1 motif domain-containing protein. (167 aa)
	F6I2G7_VITVI	Uncharacterized protein. (113 aa)
	F6HX91_VITVI	WD_REPEATS_REGION domain-containing protein. (861 aa)
	F6HWI5_VITVI	WD_REPEATS_REGION domain-containing protein. (569 aa)
	F6HLF1_VITVI	Uncharacterized protein. (1904 aa)
	D7T1D9_VITVI	Uncharacterized protein. (776 aa)
	WDR3	WD_REPEATS_REGION domain-containing protein. (952 aa)
	F6HF03_VITVI	Uncharacterized protein. (928 aa)
	E0CU59_VITVI	Brix domain-containing protein. (346 aa)
	D7U9N7_VITVI	Uncharacterized protein. (273 aa)
	D7U3A6_VITVI	Uncharacterized protein; Belongs to the carbohydrate kinase PfkB family. (367 aa)
	D7TWJ6_VITVI	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (607 aa)
	F6HCQ7_VITVI	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (695 aa)
	F6H4J0_VITVI	Brix domain-containing protein. (346 aa)
	F6GXL7_VITVI	WD_REPEATS_REGION domain-containing protein. (568 aa)
	F6GWW2_VITVI	Uncharacterized protein. (1060 aa)
	F6GSM4_VITVI	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (533 aa)
	E0CVR6_VITVI	Uncharacterized protein. (652 aa)

Your Current Organism:

Vitis vinifera

NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D7SMJ6_VITVI	D7SMM8_VITVI	D7SMJ6	D7SMM8	RRP7 domain-containing protein.	S4 RNA-binding domain-containing protein.	0.996
D7SMJ6_VITVI	D7T1D9_VITVI	D7SMJ6	D7T1D9	RRP7 domain-containing protein.	Uncharacterized protein.	0.865
D7SMJ6_VITVI	D7T591_VITVI	D7SMJ6	D7T591	RRP7 domain-containing protein.	Uncharacterized protein.	0.984
D7SMJ6_VITVI	D7T7H3_VITVI	D7SMJ6	D7T7H3	RRP7 domain-containing protein.	Uncharacterized protein.	0.992
D7SMJ6_VITVI	D7THK7_VITVI	D7SMJ6	D7THK7	RRP7 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.995
D7SMJ6_VITVI	D7TWJ6_VITVI	D7SMJ6	D7TWJ6	RRP7 domain-containing protein.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.782
D7SMJ6_VITVI	E0CU59_VITVI	D7SMJ6	E0CU59	RRP7 domain-containing protein.	Brix domain-containing protein.	0.715
D7SMJ6_VITVI	E0CVR6_VITVI	D7SMJ6	E0CVR6	RRP7 domain-containing protein.	Uncharacterized protein.	0.997
D7SMJ6_VITVI	F6GSM4_VITVI	D7SMJ6	F6GSM4	RRP7 domain-containing protein.	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.	0.992
D7SMJ6_VITVI	F6GWW2_VITVI	D7SMJ6	F6GWW2	RRP7 domain-containing protein.	Uncharacterized protein.	0.992
D7SMJ6_VITVI	F6GXL7_VITVI	D7SMJ6	F6GXL7	RRP7 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.990
D7SMJ6_VITVI	F6H4J0_VITVI	D7SMJ6	F6H4J0	RRP7 domain-containing protein.	Brix domain-containing protein.	0.714
D7SMJ6_VITVI	F6HCQ7_VITVI	D7SMJ6	F6HCQ7	RRP7 domain-containing protein.	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.	0.787
D7SMJ6_VITVI	F6HF03_VITVI	D7SMJ6	F6HF03	RRP7 domain-containing protein.	Uncharacterized protein.	0.994
D7SMJ6_VITVI	F6HLF1_VITVI	D7SMJ6	F6HLF1	RRP7 domain-containing protein.	Uncharacterized protein.	0.977
D7SMJ6_VITVI	F6HWI5_VITVI	D7SMJ6	F6HWI5	RRP7 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.990
D7SMJ6_VITVI	F6HX91_VITVI	D7SMJ6	F6HX91	RRP7 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.995
D7SMJ6_VITVI	F6I2G7_VITVI	D7SMJ6	F6I2G7	RRP7 domain-containing protein.	Uncharacterized protein.	0.984
D7SMJ6_VITVI	F6I3W1_VITVI	D7SMJ6	F6I3W1	RRP7 domain-containing protein.	S1 motif domain-containing protein.	0.977
D7SMJ6_VITVI	VITISV_041221	D7SMJ6	A5B6W8	RRP7 domain-containing protein.	Brix domain-containing protein.	0.996