11 items (Vitis vinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	26N20_60	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (229 aa)
	D7T3B4_VITVI	Uncharacterized protein. (101 aa)
	D7TF06_VITVI	Uncharacterized protein. (271 aa)
	D7TR15_VITVI	Uncharacterized protein. (96 aa)
	D7UBL1_VITVI	Uncharacterized protein. (753 aa)
	F6H683_VITVI	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (386 aa)
	F6HAX1_VITVI	Sas10 domain-containing protein. (695 aa)
	F6HKA1_VITVI	Uncharacterized protein. (271 aa)
	F6HLF1_VITVI	Uncharacterized protein. (1904 aa)
	F6I3W1_VITVI	S1 motif domain-containing protein. (167 aa)
	F6I624_VITVI	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (325 aa)

Your Current Organism:

Vitis vinifera

NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
26N20_60	D7T3B4_VITVI	C5DB53	D7T3B4	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	Uncharacterized protein.	0.984
26N20_60	D7TF06_VITVI	C5DB53	D7TF06	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	Uncharacterized protein.	0.984
26N20_60	D7TR15_VITVI	C5DB53	D7TR15	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	Uncharacterized protein.	0.994
26N20_60	D7UBL1_VITVI	C5DB53	D7UBL1	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	Uncharacterized protein.	0.931
26N20_60	F6H683_VITVI	C5DB53	F6H683	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.997
26N20_60	F6HAX1_VITVI	C5DB53	F6HAX1	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	Sas10 domain-containing protein.	0.999
26N20_60	F6HKA1_VITVI	C5DB53	F6HKA1	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	Uncharacterized protein.	0.984
26N20_60	F6HLF1_VITVI	C5DB53	F6HLF1	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	Uncharacterized protein.	0.986
26N20_60	F6I3W1_VITVI	C5DB53	F6I3W1	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	S1 motif domain-containing protein.	0.972
26N20_60	F6I624_VITVI	C5DB53	F6I624	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.	0.997
D7T3B4_VITVI	26N20_60	D7T3B4	C5DB53	Uncharacterized protein.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.984
D7T3B4_VITVI	D7TF06_VITVI	D7T3B4	D7TF06	Uncharacterized protein.	Uncharacterized protein.	0.547
D7T3B4_VITVI	D7TR15_VITVI	D7T3B4	D7TR15	Uncharacterized protein.	Uncharacterized protein.	0.943
D7T3B4_VITVI	D7UBL1_VITVI	D7T3B4	D7UBL1	Uncharacterized protein.	Uncharacterized protein.	0.905
D7T3B4_VITVI	F6H683_VITVI	D7T3B4	F6H683	Uncharacterized protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.972
D7T3B4_VITVI	F6HAX1_VITVI	D7T3B4	F6HAX1	Uncharacterized protein.	Sas10 domain-containing protein.	0.980
D7T3B4_VITVI	F6HKA1_VITVI	D7T3B4	F6HKA1	Uncharacterized protein.	Uncharacterized protein.	0.547
D7T3B4_VITVI	F6HLF1_VITVI	D7T3B4	F6HLF1	Uncharacterized protein.	Uncharacterized protein.	0.950
D7T3B4_VITVI	F6I3W1_VITVI	D7T3B4	F6I3W1	Uncharacterized protein.	S1 motif domain-containing protein.	0.896
D7T3B4_VITVI	F6I624_VITVI	D7T3B4	F6I624	Uncharacterized protein.	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.	0.990