(7 nodes) Calreticulin/calnexin network (Vitis vinifera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6HYX3_VITVI	Calreticulin. (420 aa)
	F6GX14_VITVI	Calreticulin. (433 aa)
	D7UA21_VITVI	Calreticulin. (429 aa)
	D7U2H8_VITVI	Calreticulin. (419 aa)
	D7TFL3_VITVI	Uncharacterized protein. (536 aa)
	D7T757_VITVI	Uncharacterized protein. (97 aa)
	F6HWL2_VITVI	Uncharacterized protein. (539 aa)

Your Current Organism:

Vitis vinifera

NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D7T757_VITVI	D7TFL3_VITVI	D7T757	D7TFL3	Uncharacterized protein.	Uncharacterized protein.	0.812
D7T757_VITVI	F6HWL2_VITVI	D7T757	F6HWL2	Uncharacterized protein.	Uncharacterized protein.	0.812
D7TFL3_VITVI	D7T757_VITVI	D7TFL3	D7T757	Uncharacterized protein.	Uncharacterized protein.	0.812
D7TFL3_VITVI	D7U2H8_VITVI	D7TFL3	D7U2H8	Uncharacterized protein.	Calreticulin.	0.884
D7TFL3_VITVI	D7UA21_VITVI	D7TFL3	D7UA21	Uncharacterized protein.	Calreticulin.	0.881
D7TFL3_VITVI	F6GX14_VITVI	D7TFL3	F6GX14	Uncharacterized protein.	Calreticulin.	0.888
D7TFL3_VITVI	F6HWL2_VITVI	D7TFL3	F6HWL2	Uncharacterized protein.	Uncharacterized protein.	0.901
D7TFL3_VITVI	F6HYX3_VITVI	D7TFL3	F6HYX3	Uncharacterized protein.	Calreticulin.	0.887
D7U2H8_VITVI	D7TFL3_VITVI	D7U2H8	D7TFL3	Calreticulin.	Uncharacterized protein.	0.884
D7U2H8_VITVI	F6HWL2_VITVI	D7U2H8	F6HWL2	Calreticulin.	Uncharacterized protein.	0.886
D7UA21_VITVI	D7TFL3_VITVI	D7UA21	D7TFL3	Calreticulin.	Uncharacterized protein.	0.881
D7UA21_VITVI	F6HWL2_VITVI	D7UA21	F6HWL2	Calreticulin.	Uncharacterized protein.	0.881
F6GX14_VITVI	D7TFL3_VITVI	F6GX14	D7TFL3	Calreticulin.	Uncharacterized protein.	0.888
F6GX14_VITVI	F6HWL2_VITVI	F6GX14	F6HWL2	Calreticulin.	Uncharacterized protein.	0.888
F6HWL2_VITVI	D7T757_VITVI	F6HWL2	D7T757	Uncharacterized protein.	Uncharacterized protein.	0.812
F6HWL2_VITVI	D7TFL3_VITVI	F6HWL2	D7TFL3	Uncharacterized protein.	Uncharacterized protein.	0.901
F6HWL2_VITVI	D7U2H8_VITVI	F6HWL2	D7U2H8	Uncharacterized protein.	Calreticulin.	0.886
F6HWL2_VITVI	D7UA21_VITVI	F6HWL2	D7UA21	Uncharacterized protein.	Calreticulin.	0.881
F6HWL2_VITVI	F6GX14_VITVI	F6HWL2	F6GX14	Uncharacterized protein.	Calreticulin.	0.888
F6HWL2_VITVI	F6HYX3_VITVI	F6HWL2	F6HYX3	Uncharacterized protein.	Calreticulin.	0.887