(37 nodes) Ribosomal protein S5 domain 2-type fold, subgroup network (Vitis vinifera)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

Your Input:
	F6I6Q3_VITVI	GHMP_kinases_C domain-containing protein. (291 aa)
	VITISV_031170	Tr-type G domain-containing protein. (988 aa)
	D7U271_VITVI	Uncharacterized protein. (854 aa)
	E0CQ91_VITVI	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (157 aa)
	F6H4G7_VITVI	Uncharacterized protein. (51 aa)
	F6H4T7_VITVI	Tr-type G domain-containing protein. (853 aa)
	F6H502_VITVI	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (499 aa)
	F6H710_VITVI	Uncharacterized protein. (549 aa)
	F6H9P4_VITVI	Uncharacterized protein. (597 aa)
	F6HBC4_VITVI	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1489 aa)
	F6HD94_VITVI	Ribosomal_S5_C domain-containing protein. (81 aa)
	F6HDB0_VITVI	Uncharacterized protein. (211 aa)
	D7U1Z2_VITVI	Mevalonate kinase. (388 aa)
	D7U088_VITVI	RECA_2 domain-containing protein. (545 aa)
	D7TXN8_VITVI	Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family. (422 aa)
	F6HUT8_VITVI	GHMP_kinases_N domain-containing protein. (376 aa)
	F6HVP7_VITVI	EFG_IV domain-containing protein. (67 aa)
	D7TTP0_VITVI	Uncharacterized protein. (508 aa)
	D7TTJ0_VITVI	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import; Belongs to the peptidase S16 family. ECO:0000256\|PROSITE-. (888 aa)
	D7TIQ6_VITVI	DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded DNA in an ATP-dependent manner. (707 aa)
	D7T1C6_VITVI	GHMP_kinases_N domain-containing protein. (394 aa)
	D7SU50_VITVI	Uncharacterized protein. (1002 aa)
	D7SLS6_VITVI	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (746 aa)
	TOP6B	DNA topoisomerase 6 subunit B; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. The B subunit binds ATP; Belongs to the TOP6B family. (673 aa)
	VITISV_035308	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (144 aa)
	F6HY77_VITVI	RECA_2 domain-containing protein. (629 aa)
	F6HYK1_VITVI	Uncharacterized protein. (368 aa)
	F6I0B7_VITVI	Tr-type G domain-containing protein. (1030 aa)
	F6I0J7_VITVI	Uncharacterized protein. (1220 aa)
	MLH1	DNA_mis_repair domain-containing protein. (381 aa)
	VITISV_019246	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (209 aa)
	VITISV_042472	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (273 aa)
	F6HHS2_VITVI	Elongation factor G, chloroplastic; Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl- tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (775 aa)
	VITISV_043432	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (357 aa)
	VITISV_012186	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (144 aa)
	F6I4S4_VITVI	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. (978 aa)
	F6I6Q2_VITVI	GalKase_gal_bdg domain-containing protein. (185 aa)

Your Current Organism:

Vitis vinifera

NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D7SLS6_VITVI	E0CQ91_VITVI	D7SLS6	E0CQ91	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.640
D7SLS6_VITVI	F6H502_VITVI	D7SLS6	F6H502	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.777
D7SLS6_VITVI	F6HD94_VITVI	D7SLS6	F6HD94	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	Ribosomal_S5_C domain-containing protein.	0.746
D7SLS6_VITVI	VITISV_012186	D7SLS6	A5ASC2	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.640
D7SLS6_VITVI	VITISV_019246	D7SLS6	A5BPF9	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.815
D7SLS6_VITVI	VITISV_035308	D7SLS6	A5BX24	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.640
D7SLS6_VITVI	VITISV_042472	D7SLS6	A5BIQ8	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.951
D7SLS6_VITVI	VITISV_043432	D7SLS6	A5AZM9	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.815
D7SU50_VITVI	F6H9P4_VITVI	D7SU50	F6H9P4	Uncharacterized protein.	Uncharacterized protein.	0.901
D7SU50_VITVI	F6HUT8_VITVI	D7SU50	F6HUT8	Uncharacterized protein.	GHMP_kinases_N domain-containing protein.	0.823
D7T1C6_VITVI	D7TTP0_VITVI	D7T1C6	D7TTP0	GHMP_kinases_N domain-containing protein.	Uncharacterized protein.	0.775
D7T1C6_VITVI	D7TXN8_VITVI	D7T1C6	D7TXN8	GHMP_kinases_N domain-containing protein.	Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family.	0.819
D7T1C6_VITVI	D7U1Z2_VITVI	D7T1C6	D7U1Z2	GHMP_kinases_N domain-containing protein.	Mevalonate kinase.	0.837
D7TIQ6_VITVI	F6I0B7_VITVI	D7TIQ6	F6I0B7	DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded DNA in an ATP-dependent manner.	Tr-type G domain-containing protein.	0.450
D7TIQ6_VITVI	TOP6B	D7TIQ6	D7SLA7	DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded DNA in an ATP-dependent manner.	DNA topoisomerase 6 subunit B; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. The B subunit binds ATP; Belongs to the TOP6B family.	0.431
D7TTP0_VITVI	D7T1C6_VITVI	D7TTP0	D7T1C6	Uncharacterized protein.	GHMP_kinases_N domain-containing protein.	0.775
D7TTP0_VITVI	D7TXN8_VITVI	D7TTP0	D7TXN8	Uncharacterized protein.	Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family.	0.995
D7TTP0_VITVI	D7U1Z2_VITVI	D7TTP0	D7U1Z2	Uncharacterized protein.	Mevalonate kinase.	0.993
D7TTP0_VITVI	F6HYK1_VITVI	D7TTP0	F6HYK1	Uncharacterized protein.	Uncharacterized protein.	0.546
D7TXN8_VITVI	D7T1C6_VITVI	D7TXN8	D7T1C6	Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family.	GHMP_kinases_N domain-containing protein.	0.819