(51 nodes) Squalene cyclase network (Vitis vinifera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6HLS7_VITVI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (791 aa)
	F6HCQ0_VITVI	Uncharacterized protein. (68 aa)
	F6HJL5_VITVI	SQHop_cyclase_N domain-containing protein. (64 aa)
	F6HLS1_VITVI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (726 aa)
	F6HLS3_VITVI	Uncharacterized protein. (113 aa)
	F6HLS4_VITVI	SQHop_cyclase_N domain-containing protein. (295 aa)
	F6HLS5_VITVI	SQHop_cyclase_N domain-containing protein. (282 aa)
	F6GYK3_VITVI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (796 aa)
	F6GYK2_VITVI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (712 aa)
	F6H2W3_VITVI	SQHop_cyclase_N domain-containing protein. (307 aa)
	F6H9M9_VITVI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (758 aa)
	F6H2W2_VITVI	Uncharacterized protein. (94 aa)
	F6H9N1_VITVI	Uncharacterized protein. (67 aa)
	F6GYK5_VITVI	Uncharacterized protein; Belongs to the terpene cyclase/mutase family. (949 aa)
	F6GYI7_VITVI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (869 aa)
	F6GYI8_VITVI	Uncharacterized protein. (74 aa)
	F6GYI9_VITVI	Uncharacterized protein. (100 aa)
	F6GYJ2_VITVI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (767 aa)
	F6GYJ4_VITVI	Uncharacterized protein. (414 aa)
	F6GYJ6_VITVI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (769 aa)
	D7SRX7_VITVI	Uncharacterized protein. (101 aa)
	D7SRX3_VITVI	SQHop_cyclase_N domain-containing protein. (297 aa)
	D7SRX0_VITVI	Uncharacterized protein. (355 aa)
	D7SRW9_VITVI	Uncharacterized protein. (129 aa)
	D7SRW4_VITVI	SQHop_cyclase_C domain-containing protein. (68 aa)
	D7SRW3_VITVI	SQHop_cyclase_C domain-containing protein; Belongs to the terpene cyclase/mutase family. (512 aa)
	D7SRW2_VITVI	Uncharacterized protein. (134 aa)
	D7SRW0_VITVI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (769 aa)
	D7SRV7_VITVI	Uncharacterized protein. (66 aa)
	D7SRV9_VITVI	Uncharacterized protein. (109 aa)
	F6GYI4_VITVI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (758 aa)
	F6GVI1_VITVI	SQHop_cyclase_N domain-containing protein. (165 aa)
	F6GVI0_VITVI	SQHop_cyclase_C domain-containing protein. (262 aa)
	D7TK84_VITVI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (759 aa)
	D7TK75_VITVI	Uncharacterized protein. (144 aa)
	D7TK74_VITVI	SQHop_cyclase_N domain-containing protein. (275 aa)
	D7TK72_VITVI	Uncharacterized protein. (100 aa)
	F6GYJ7_VITVI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (757 aa)
	F6GYJ8_VITVI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (757 aa)
	F6GYJ9_VITVI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (643 aa)
	F6GYK0_VITVI	Uncharacterized protein. (198 aa)
	F6GYK1_VITVI	Uncharacterized protein. (187 aa)
	D7SRV4_VITVI	SQHop_cyclase_C domain-containing protein. (394 aa)
	D7SRV3_VITVI	SQHop_cyclase_N domain-containing protein. (420 aa)
	D7SM94_VITVI	Uncharacterized protein. (89 aa)
	D7TK70_VITVI	SQHop_cyclase_N domain-containing protein. (223 aa)
	D7TK68_VITVI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (753 aa)
	D7T0P8_VITVI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (760 aa)
	D7SU63_VITVI	SQHop_cyclase_C domain-containing protein. (156 aa)
	D7SRY1_VITVI	SQHop_cyclase_C domain-containing protein. (101 aa)
	F6HBS6_VITVI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (758 aa)

Your Current Organism:

Vitis vinifera

NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D7SM94_VITVI	D7SRV3_VITVI	D7SM94	D7SRV3	Uncharacterized protein.	SQHop_cyclase_N domain-containing protein.	0.467
D7SM94_VITVI	D7SRV9_VITVI	D7SM94	D7SRV9	Uncharacterized protein.	Uncharacterized protein.	0.491
D7SM94_VITVI	D7SRW9_VITVI	D7SM94	D7SRW9	Uncharacterized protein.	Uncharacterized protein.	0.516
D7SM94_VITVI	D7TK70_VITVI	D7SM94	D7TK70	Uncharacterized protein.	SQHop_cyclase_N domain-containing protein.	0.444
D7SM94_VITVI	D7TK74_VITVI	D7SM94	D7TK74	Uncharacterized protein.	SQHop_cyclase_N domain-containing protein.	0.444
D7SM94_VITVI	F6GVI0_VITVI	D7SM94	F6GVI0	Uncharacterized protein.	SQHop_cyclase_C domain-containing protein.	0.419
D7SM94_VITVI	F6GVI1_VITVI	D7SM94	F6GVI1	Uncharacterized protein.	SQHop_cyclase_N domain-containing protein.	0.535
D7SM94_VITVI	F6GYJ4_VITVI	D7SM94	F6GYJ4	Uncharacterized protein.	Uncharacterized protein.	0.413
D7SM94_VITVI	F6GYK1_VITVI	D7SM94	F6GYK1	Uncharacterized protein.	Uncharacterized protein.	0.516
D7SM94_VITVI	F6H2W3_VITVI	D7SM94	F6H2W3	Uncharacterized protein.	SQHop_cyclase_N domain-containing protein.	0.523
D7SM94_VITVI	F6HLS5_VITVI	D7SM94	F6HLS5	Uncharacterized protein.	SQHop_cyclase_N domain-containing protein.	0.403
D7SRV3_VITVI	D7SM94_VITVI	D7SRV3	D7SM94	SQHop_cyclase_N domain-containing protein.	Uncharacterized protein.	0.467
D7SRV3_VITVI	D7SRV4_VITVI	D7SRV3	D7SRV4	SQHop_cyclase_N domain-containing protein.	SQHop_cyclase_C domain-containing protein.	0.933
D7SRV3_VITVI	D7SRV9_VITVI	D7SRV3	D7SRV9	SQHop_cyclase_N domain-containing protein.	Uncharacterized protein.	0.442
D7SRV3_VITVI	D7SRX7_VITVI	D7SRV3	D7SRX7	SQHop_cyclase_N domain-containing protein.	Uncharacterized protein.	0.552
D7SRV3_VITVI	D7SRY1_VITVI	D7SRV3	D7SRY1	SQHop_cyclase_N domain-containing protein.	SQHop_cyclase_C domain-containing protein.	0.519
D7SRV3_VITVI	D7SU63_VITVI	D7SRV3	D7SU63	SQHop_cyclase_N domain-containing protein.	SQHop_cyclase_C domain-containing protein.	0.520
D7SRV3_VITVI	F6GVI0_VITVI	D7SRV3	F6GVI0	SQHop_cyclase_N domain-containing protein.	SQHop_cyclase_C domain-containing protein.	0.875
D7SRV3_VITVI	F6GYJ4_VITVI	D7SRV3	F6GYJ4	SQHop_cyclase_N domain-containing protein.	Uncharacterized protein.	0.869
D7SRV4_VITVI	D7SRV3_VITVI	D7SRV4	D7SRV3	SQHop_cyclase_C domain-containing protein.	SQHop_cyclase_N domain-containing protein.	0.933