(7 nodes) Peptidase M4/M1, CTD superfamily network (Vitis vinifera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D7UDL1_VITVI	Uncharacterized protein. (66 aa)
	D7STT1_VITVI	Aminopeptidase. (880 aa)
	D7TVX4_VITVI	Peptidase_M1 domain-containing protein. (482 aa)
	D7TVX5_VITVI	Uncharacterized protein. (495 aa)
	F6HY05_VITVI	Aminopeptidase. (885 aa)
	F6HC66_VITVI	Leuk-A4-hydro_C domain-containing protein. (611 aa)
	F6GTI2_VITVI	Peptidase_M1 domain-containing protein. (1359 aa)

Your Current Organism:

Vitis vinifera

NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D7TVX4_VITVI	D7TVX5_VITVI	D7TVX4	D7TVX5	Peptidase_M1 domain-containing protein.	Uncharacterized protein.	0.951
D7TVX5_VITVI	D7TVX4_VITVI	D7TVX5	D7TVX4	Uncharacterized protein.	Peptidase_M1 domain-containing protein.	0.951
D7TVX5_VITVI	D7UDL1_VITVI	D7TVX5	D7UDL1	Uncharacterized protein.	Uncharacterized protein.	0.538
D7UDL1_VITVI	D7TVX5_VITVI	D7UDL1	D7TVX5	Uncharacterized protein.	Uncharacterized protein.	0.538
F6GTI2_VITVI	F6HC66_VITVI	F6GTI2	F6HC66	Peptidase_M1 domain-containing protein.	Leuk-A4-hydro_C domain-containing protein.	0.602
F6HC66_VITVI	F6GTI2_VITVI	F6HC66	F6GTI2	Leuk-A4-hydro_C domain-containing protein.	Peptidase_M1 domain-containing protein.	0.602