(16 nodes) Metal-dependent hydrolase network (Vitis vinifera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6I5I8_VITVI	Uncharacterized protein. (314 aa)
	D7UBN5_VITVI	Amidohydro_3 domain-containing protein. (578 aa)
	F6HIZ5_VITVI	Uncharacterized protein. (99 aa)
	D7U8S7_VITVI	Uncharacterized protein. (320 aa)
	D7TIU8_VITVI	Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family. (840 aa)
	D7TAQ4_VITVI	Urease; In the C-terminal section; belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family. (835 aa)
	D7T187_VITVI	Amidohydro-rel domain-containing protein. (536 aa)
	D7SY29_VITVI	A_deaminase domain-containing protein. (860 aa)
	D7SUM7_VITVI	Uncharacterized protein. (101 aa)
	D7SNQ9_VITVI	A_deaminase domain-containing protein. (128 aa)
	VITISV_030807	Uncharacterized protein. (355 aa)
	F6HPG0_VITVI	A_deaminase domain-containing protein. (883 aa)
	F6I058_VITVI	Uncharacterized protein; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family. (173 aa)
	F6I1N0_VITVI	Amidohydro-rel domain-containing protein; Belongs to the metallo-dependent hydrolases superfamily. (340 aa)
	F6I1N3_VITVI	Amidohydro-rel domain-containing protein. (469 aa)
	F6H5E5_VITVI	Amidohydro-rel domain-containing protein. (377 aa)

Your Current Organism:

Vitis vinifera

NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D7SNQ9_VITVI	VITISV_030807	D7SNQ9	A5C4M9	A_deaminase domain-containing protein.	Uncharacterized protein.	0.454
D7SUM7_VITVI	VITISV_030807	D7SUM7	A5C4M9	Uncharacterized protein.	Uncharacterized protein.	0.454
D7SY29_VITVI	F6HPG0_VITVI	D7SY29	F6HPG0	A_deaminase domain-containing protein.	A_deaminase domain-containing protein.	0.901
D7SY29_VITVI	VITISV_030807	D7SY29	A5C4M9	A_deaminase domain-containing protein.	Uncharacterized protein.	0.512
D7T187_VITVI	F6H5E5_VITVI	D7T187	F6H5E5	Amidohydro-rel domain-containing protein.	Amidohydro-rel domain-containing protein.	0.776
F6H5E5_VITVI	D7T187_VITVI	F6H5E5	D7T187	Amidohydro-rel domain-containing protein.	Amidohydro-rel domain-containing protein.	0.776
F6H5E5_VITVI	F6HIZ5_VITVI	F6H5E5	F6HIZ5	Amidohydro-rel domain-containing protein.	Uncharacterized protein.	0.776
F6HIZ5_VITVI	F6H5E5_VITVI	F6HIZ5	F6H5E5	Uncharacterized protein.	Amidohydro-rel domain-containing protein.	0.776
F6HPG0_VITVI	D7SY29_VITVI	F6HPG0	D7SY29	A_deaminase domain-containing protein.	A_deaminase domain-containing protein.	0.901
F6HPG0_VITVI	VITISV_030807	F6HPG0	A5C4M9	A_deaminase domain-containing protein.	Uncharacterized protein.	0.454
F6I1N3_VITVI	VITISV_030807	F6I1N3	A5C4M9	Amidohydro-rel domain-containing protein.	Uncharacterized protein.	0.519
VITISV_030807	D7SNQ9_VITVI	A5C4M9	D7SNQ9	Uncharacterized protein.	A_deaminase domain-containing protein.	0.454
VITISV_030807	D7SUM7_VITVI	A5C4M9	D7SUM7	Uncharacterized protein.	Uncharacterized protein.	0.454
VITISV_030807	D7SY29_VITVI	A5C4M9	D7SY29	Uncharacterized protein.	A_deaminase domain-containing protein.	0.512
VITISV_030807	F6HPG0_VITVI	A5C4M9	F6HPG0	Uncharacterized protein.	A_deaminase domain-containing protein.	0.454
VITISV_030807	F6I1N3_VITVI	A5C4M9	F6I1N3	Uncharacterized protein.	Amidohydro-rel domain-containing protein.	0.519