53 items (Vitis vinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GER	Terpene_synth_C domain-containing protein. (294 aa)
	D7SQP4_VITVI	Terpene_synth_C domain-containing protein. (292 aa)
	D7T123_VITVI	Uncharacterized protein. (826 aa)
	D7TL95_VITVI	Terpene_synth_C domain-containing protein. (252 aa)
	D7TL96_VITVI	Uncharacterized protein. (561 aa)
	D7TLA9_VITVI	Terpene_synth_C domain-containing protein. (252 aa)
	D7TLC0_VITVI	Terpene_synth_C domain-containing protein. (254 aa)
	F6HN19_VITVI	Uncharacterized protein. (616 aa)
	D7TLC3_VITVI	Terpene_synth_C domain-containing protein. (234 aa)
	D7TLC8_VITVI	Uncharacterized protein. (555 aa)
	D7TLC9_VITVI	Uncharacterized protein. (561 aa)
	F6HN25_VITVI	Uncharacterized protein. (482 aa)
	D7TRU4_VITVI	Uncharacterized protein. (490 aa)
	D7TRU5_VITVI	Uncharacterized protein. (508 aa)
	F6HN27_VITVI	Uncharacterized protein. (527 aa)
	D7U6G8_VITVI	(E)-beta-ocimene/(E,E)-alpha-farnesene synthase. (566 aa)
	D7U6J9_VITVI	Terpene_synth_C domain-containing protein. (317 aa)
	E0CS75_VITVI	Uncharacterized protein. (559 aa)
	E0CS76_VITVI	Uncharacterized protein. (560 aa)
	E0CSI8_VITVI	Uncharacterized protein. (595 aa)
	E5GAF6_VITVI	(E)-alpha-bergamotene synthase. (561 aa)
	E5GAF7_VITVI	Terpene synthase. (555 aa)
	E5GAG5_VITVI	(E)-beta-ocimene synthase. (601 aa)
	F6GXN7_VITVI	Uncharacterized protein. (579 aa)
	F6GXN8_VITVI	Terpene_synth_C domain-containing protein. (224 aa)
	F6H239_VITVI	Uncharacterized protein. (517 aa)
	F6H2I3_VITVI	Terpene_synth_C domain-containing protein. (382 aa)
	F6H2I4_VITVI	Uncharacterized protein. (604 aa)
	F6H867_VITVI	Terpene_synth_C domain-containing protein. (406 aa)
	F6H868_VITVI	Uncharacterized protein. (507 aa)
	F6H870_VITVI	Uncharacterized protein. (645 aa)
	F6H873_VITVI	Uncharacterized protein. (427 aa)
	F6H895_VITVI	Uncharacterized protein. (450 aa)
	F6H896_VITVI	Uncharacterized protein. (507 aa)
	F6H8B3_VITVI	Uncharacterized protein. (411 aa)
	F6HDC9_VITVI	Uncharacterized protein. (395 aa)
	F6HMZ2_VITVI	Uncharacterized protein. (627 aa)
	F6HMZ4_VITVI	Uncharacterized protein. (505 aa)
	F6HN28_VITVI	Uncharacterized protein. (703 aa)
	F6HV95_VITVI	Uncharacterized protein. (551 aa)
	F6I4Y2_VITVI	Uncharacterized protein. (562 aa)
	F6I5S7_VITVI	Uncharacterized protein. (422 aa)
	F6I5S9_VITVI	Uncharacterized protein. (440 aa)
	F6I6J8_VITVI	Terpene_synth_C domain-containing protein. (350 aa)
	F6I6J9_VITVI	Uncharacterized protein. (521 aa)
	F6I6K6_VITVI	Uncharacterized protein. (590 aa)
	F6I7A6_VITVI	Uncharacterized protein. (507 aa)
	F6I7A7_VITVI	Uncharacterized protein. (487 aa)
	F6I7B0_VITVI	Uncharacterized protein. (517 aa)
	F6I7F6_VITVI	Uncharacterized protein. (492 aa)
	F6I7F8_VITVI	Uncharacterized protein. (482 aa)
	LinNer	Uncharacterized protein. (577 aa)
	VITISV_013313	(-)-germacrene D synthase; Involved in the biosynthesis of germacrene D. Can use farnesyl diphosphate as substrate, but not geranyl diphosphate or geranylgeranyl diphosphate. Produces mainly (-)-germacrene D along with gamma-cadinene. (557 aa)

Your Current Organism:

Vitis vinifera

NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D7TL96_VITVI	D7TRU4_VITVI	D7TL96	D7TRU4	Uncharacterized protein.	Uncharacterized protein.	0.653
D7TL96_VITVI	D7TRU5_VITVI	D7TL96	D7TRU5	Uncharacterized protein.	Uncharacterized protein.	0.653
D7TL96_VITVI	D7U6G8_VITVI	D7TL96	D7U6G8	Uncharacterized protein.	(E)-beta-ocimene/(E,E)-alpha-farnesene synthase.	0.650
D7TL96_VITVI	D7U6J9_VITVI	D7TL96	D7U6J9	Uncharacterized protein.	Terpene_synth_C domain-containing protein.	0.650
D7TL96_VITVI	F6H868_VITVI	D7TL96	F6H868	Uncharacterized protein.	Uncharacterized protein.	0.653
D7TL96_VITVI	F6H870_VITVI	D7TL96	F6H870	Uncharacterized protein.	Uncharacterized protein.	0.653
D7TL96_VITVI	F6H896_VITVI	D7TL96	F6H896	Uncharacterized protein.	Uncharacterized protein.	0.653
D7TL96_VITVI	F6HN19_VITVI	D7TL96	F6HN19	Uncharacterized protein.	Uncharacterized protein.	0.900
D7TL96_VITVI	F6I7A6_VITVI	D7TL96	F6I7A6	Uncharacterized protein.	Uncharacterized protein.	0.653
D7TL96_VITVI	F6I7F6_VITVI	D7TL96	F6I7F6	Uncharacterized protein.	Uncharacterized protein.	0.671
D7TL96_VITVI	F6I7F8_VITVI	D7TL96	F6I7F8	Uncharacterized protein.	Uncharacterized protein.	0.653
D7TL96_VITVI	LinNer	D7TL96	F6I7G1	Uncharacterized protein.	Uncharacterized protein.	0.653
D7TLC9_VITVI	D7TRU4_VITVI	D7TLC9	D7TRU4	Uncharacterized protein.	Uncharacterized protein.	0.653
D7TLC9_VITVI	D7TRU5_VITVI	D7TLC9	D7TRU5	Uncharacterized protein.	Uncharacterized protein.	0.653
D7TLC9_VITVI	D7U6G8_VITVI	D7TLC9	D7U6G8	Uncharacterized protein.	(E)-beta-ocimene/(E,E)-alpha-farnesene synthase.	0.650
D7TLC9_VITVI	D7U6J9_VITVI	D7TLC9	D7U6J9	Uncharacterized protein.	Terpene_synth_C domain-containing protein.	0.650
D7TLC9_VITVI	F6H868_VITVI	D7TLC9	F6H868	Uncharacterized protein.	Uncharacterized protein.	0.653
D7TLC9_VITVI	F6H870_VITVI	D7TLC9	F6H870	Uncharacterized protein.	Uncharacterized protein.	0.653
D7TLC9_VITVI	F6H896_VITVI	D7TLC9	F6H896	Uncharacterized protein.	Uncharacterized protein.	0.653
D7TLC9_VITVI	F6HN19_VITVI	D7TLC9	F6HN19	Uncharacterized protein.	Uncharacterized protein.	0.902