(5 nodes) YqgF/RNase H-like domain superfamily network (Vitis vinifera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6GV53_VITVI	YqgFc domain-containing protein. (233 aa)
	D7TW01_VITVI	YqgFc domain-containing protein. (224 aa)
	D7UCY1_VITVI	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1408 aa)
	F6HQR0_VITVI	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1665 aa)
	F6I6K8_VITVI	S1 motif domain-containing protein. (695 aa)

Your Current Organism:

Vitis vinifera

NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D7UCY1_VITVI	F6HQR0_VITVI	D7UCY1	F6HQR0	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.	0.548
D7UCY1_VITVI	F6I6K8_VITVI	D7UCY1	F6I6K8	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.	S1 motif domain-containing protein.	0.547
F6HQR0_VITVI	D7UCY1_VITVI	F6HQR0	D7UCY1	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.	0.548
F6HQR0_VITVI	F6I6K8_VITVI	F6HQR0	F6I6K8	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.	S1 motif domain-containing protein.	0.547
F6I6K8_VITVI	D7UCY1_VITVI	F6I6K8	D7UCY1	S1 motif domain-containing protein.	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.	0.547
F6I6K8_VITVI	F6HQR0_VITVI	F6I6K8	F6HQR0	S1 motif domain-containing protein.	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.	0.547