STRINGSTRING
D7SLL4_VITVI D7SLL4_VITVI D7SSW3_VITVI D7SSW3_VITVI D7U3N1_VITVI D7U3N1_VITVI F6GZI7_VITVI F6GZI7_VITVI F6H2W4_VITVI F6H2W4_VITVI F6H977_VITVI F6H977_VITVI F6HGX0_VITVI F6HGX0_VITVI F6I2J8_VITVI F6I2J8_VITVI F6I4L4_VITVI F6I4L4_VITVI F6I5G4_VITVI F6I5G4_VITVI F6I6Z8_VITVI F6I6Z8_VITVI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
D7SLL4_VITVILysine--tRNA ligase. (592 aa)
D7SSW3_VITVItRNA-synt_2 domain-containing protein. (145 aa)
D7U3N1_VITVIAA_TRNA_LIGASE_II domain-containing protein. (584 aa)
F6GZI7_VITVIUncharacterized protein. (270 aa)
F6H2W4_VITVIAA_TRNA_LIGASE_II domain-containing protein. (544 aa)
F6H977_VITVIWHEP-TRS domain-containing protein. (300 aa)
F6HGX0_VITVIUncharacterized protein. (571 aa)
F6I2J8_VITVIWHEP-TRS domain-containing protein. (620 aa)
F6I4L4_VITVILysine--tRNA ligase. (1578 aa)
F6I5G4_VITVILysine--tRNA ligase. (660 aa)
F6I6Z8_VITVIWHEP-TRS domain-containing protein. (464 aa)
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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