(30 nodes) Prenyltransferase and squalene oxidase repeat network (Vitis vinifera)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	F6GYJ8_VITVI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (757 aa)
	D7TLT2_VITVI	Uncharacterized protein. (351 aa)
	D7TK84_VITVI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (759 aa)
	D7TK74_VITVI	SQHop_cyclase_N domain-containing protein. (275 aa)
	D7TK70_VITVI	SQHop_cyclase_N domain-containing protein. (223 aa)
	F6GVI0_VITVI	SQHop_cyclase_C domain-containing protein. (262 aa)
	F6GYI4_VITVI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (758 aa)
	F6GYI7_VITVI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (869 aa)
	F6GYJ2_VITVI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (767 aa)
	F6GYJ4_VITVI	Uncharacterized protein. (414 aa)
	F6GYJ6_VITVI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (769 aa)
	F6GYJ7_VITVI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (757 aa)
	D7TWQ3_VITVI	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. (421 aa)
	F6GYJ9_VITVI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (643 aa)
	F6GYK2_VITVI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (712 aa)
	F6GYK3_VITVI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (796 aa)
	F6GYK5_VITVI	Uncharacterized protein; Belongs to the terpene cyclase/mutase family. (949 aa)
	F6H9M9_VITVI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (758 aa)
	F6HBS6_VITVI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (758 aa)
	F6HLS1_VITVI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (726 aa)
	F6HLS5_VITVI	SQHop_cyclase_N domain-containing protein. (282 aa)
	F6HLS7_VITVI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (791 aa)
	F6I5I6_VITVI	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (345 aa)
	D7TK68_VITVI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (753 aa)
	D7T0P8_VITVI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (760 aa)
	D7SRW3_VITVI	SQHop_cyclase_C domain-containing protein; Belongs to the terpene cyclase/mutase family. (512 aa)
	D7SRW0_VITVI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (769 aa)
	D7SRV4_VITVI	SQHop_cyclase_C domain-containing protein. (394 aa)
	D7SRV3_VITVI	SQHop_cyclase_N domain-containing protein. (420 aa)
	VITISV_024797	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (317 aa)

Your Current Organism:

Vitis vinifera

NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D7SRV3_VITVI	D7SRV4_VITVI	D7SRV3	D7SRV4	SQHop_cyclase_N domain-containing protein.	SQHop_cyclase_C domain-containing protein.	0.933
D7SRV3_VITVI	F6GVI0_VITVI	D7SRV3	F6GVI0	SQHop_cyclase_N domain-containing protein.	SQHop_cyclase_C domain-containing protein.	0.875
D7SRV3_VITVI	F6GYJ4_VITVI	D7SRV3	F6GYJ4	SQHop_cyclase_N domain-containing protein.	Uncharacterized protein.	0.869
D7SRV4_VITVI	D7SRV3_VITVI	D7SRV4	D7SRV3	SQHop_cyclase_C domain-containing protein.	SQHop_cyclase_N domain-containing protein.	0.933
D7SRV4_VITVI	D7TK70_VITVI	D7SRV4	D7TK70	SQHop_cyclase_C domain-containing protein.	SQHop_cyclase_N domain-containing protein.	0.666
D7SRV4_VITVI	D7TK74_VITVI	D7SRV4	D7TK74	SQHop_cyclase_C domain-containing protein.	SQHop_cyclase_N domain-containing protein.	0.660
D7SRV4_VITVI	F6HLS5_VITVI	D7SRV4	F6HLS5	SQHop_cyclase_C domain-containing protein.	SQHop_cyclase_N domain-containing protein.	0.630
D7SRW0_VITVI	F6H9M9_VITVI	D7SRW0	F6H9M9	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.	0.903
D7SRW3_VITVI	D7TK70_VITVI	D7SRW3	D7TK70	SQHop_cyclase_C domain-containing protein; Belongs to the terpene cyclase/mutase family.	SQHop_cyclase_N domain-containing protein.	0.540
D7SRW3_VITVI	F6HLS5_VITVI	D7SRW3	F6HLS5	SQHop_cyclase_C domain-containing protein; Belongs to the terpene cyclase/mutase family.	SQHop_cyclase_N domain-containing protein.	0.575
D7T0P8_VITVI	F6GYI4_VITVI	D7T0P8	F6GYI4	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.	0.901
D7T0P8_VITVI	F6HBS6_VITVI	D7T0P8	F6HBS6	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.	0.901
D7TK68_VITVI	F6H9M9_VITVI	D7TK68	F6H9M9	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.	0.904
D7TK70_VITVI	D7SRV4_VITVI	D7TK70	D7SRV4	SQHop_cyclase_N domain-containing protein.	SQHop_cyclase_C domain-containing protein.	0.666
D7TK70_VITVI	D7SRW3_VITVI	D7TK70	D7SRW3	SQHop_cyclase_N domain-containing protein.	SQHop_cyclase_C domain-containing protein; Belongs to the terpene cyclase/mutase family.	0.540
D7TK70_VITVI	F6GVI0_VITVI	D7TK70	F6GVI0	SQHop_cyclase_N domain-containing protein.	SQHop_cyclase_C domain-containing protein.	0.633
D7TK70_VITVI	F6GYJ4_VITVI	D7TK70	F6GYJ4	SQHop_cyclase_N domain-containing protein.	Uncharacterized protein.	0.645
D7TK74_VITVI	D7SRV4_VITVI	D7TK74	D7SRV4	SQHop_cyclase_N domain-containing protein.	SQHop_cyclase_C domain-containing protein.	0.660
D7TK74_VITVI	F6GVI0_VITVI	D7TK74	F6GVI0	SQHop_cyclase_N domain-containing protein.	SQHop_cyclase_C domain-containing protein.	0.619
D7TK74_VITVI	F6GYJ4_VITVI	D7TK74	F6GYJ4	SQHop_cyclase_N domain-containing protein.	Uncharacterized protein.	0.631