STRINGSTRING
D7SQB0_VITVI D7SQB0_VITVI VITISV_023849 VITISV_023849 D7SLL4_VITVI D7SLL4_VITVI D7T3N6_VITVI D7T3N6_VITVI D7TCH6_VITVI D7TCH6_VITVI D7U3N1_VITVI D7U3N1_VITVI F6HGX0_VITVI F6HGX0_VITVI F6I092_VITVI F6I092_VITVI F6I4L4_VITVI F6I4L4_VITVI F6I5G4_VITVI F6I5G4_VITVI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
D7SQB0_VITVIUncharacterized protein. (277 aa)
VITISV_023849OB domain-containing protein. (165 aa)
D7SLL4_VITVILysine--tRNA ligase. (592 aa)
D7T3N6_VITVIAA_TRNA_LIGASE_II domain-containing protein. (657 aa)
D7TCH6_VITVIReplication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (622 aa)
D7U3N1_VITVIAA_TRNA_LIGASE_II domain-containing protein. (584 aa)
F6HGX0_VITVIUncharacterized protein. (571 aa)
F6I092_VITVIReplication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (882 aa)
F6I4L4_VITVILysine--tRNA ligase. (1578 aa)
F6I5G4_VITVILysine--tRNA ligase. (660 aa)
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.