(22 nodes) Membrane transport protein network (Vitis vinifera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6GSK5_VITVI	Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family. (594 aa)
	VITISV_042448	Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family. (357 aa)
	D7SPR0_VITVI	Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family. (361 aa)
	D7SPS2_VITVI	Uncharacterized protein. (84 aa)
	D7SPS3_VITVI	Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family. (356 aa)
	D7SWC1_VITVI	Uncharacterized protein. (421 aa)
	D7U491_VITVI	Uncharacterized protein. (133 aa)
	D7U493_VITVI	Uncharacterized protein. (459 aa)
	D7U495_VITVI	Uncharacterized protein. (418 aa)
	D7U9N0_VITVI	Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family. (463 aa)
	F6GXI9_VITVI	Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family. (630 aa)
	F6H096_VITVI	Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family. (550 aa)
	F6HFI3_VITVI	Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family. (649 aa)
	F6HFJ8_VITVI	Uncharacterized protein. (436 aa)
	F6HJB6_VITVI	Uncharacterized protein. (308 aa)
	F6HMR9_VITVI	Uncharacterized protein. (405 aa)
	F6HR60_VITVI	Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family. (597 aa)
	F6HR61_VITVI	Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family. (599 aa)
	F6HSM7_VITVI	Uncharacterized protein. (480 aa)
	F6HWA8_VITVI	Uncharacterized protein. (375 aa)
	F6I0B3_VITVI	Uncharacterized protein. (380 aa)
	F6I0B4_VITVI	Uncharacterized protein. (418 aa)

Your Current Organism:

Vitis vinifera

NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D7U493_VITVI	D7U9N0_VITVI	D7U493	D7U9N0	Uncharacterized protein.	Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family.	0.611
D7U495_VITVI	D7U9N0_VITVI	D7U495	D7U9N0	Uncharacterized protein.	Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family.	0.611
D7U9N0_VITVI	D7U493_VITVI	D7U9N0	D7U493	Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family.	Uncharacterized protein.	0.611
D7U9N0_VITVI	D7U495_VITVI	D7U9N0	D7U495	Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family.	Uncharacterized protein.	0.611