(12 nodes) (2010) 3-coterminal subgenomic RNAs and putative cis-acting elements of Grapevine leafroll-associated virus 3 reveals unique features of gene expression strategy in the genus Ampelovirus. network (Vitis vinifera)

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Your Input:
	F6GTH7_VITVI	RNA helicase. (550 aa)
	F6HY92_VITVI	Uncharacterized protein. (756 aa)
	F6GSU3_VITVI	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. (951 aa)
	D7TBH5_VITVI	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. (929 aa)
	F6HFC8_VITVI	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. (1109 aa)
	F6HFL7_VITVI	Uncharacterized protein. (716 aa)
	F6HGM8_VITVI	RNA helicase. (600 aa)
	F6HFC7_VITVI	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. (1085 aa)
	F6HCA5_VITVI	RNA helicase. (595 aa)
	D7TBF6_VITVI	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (598 aa)
	D7SYI5_VITVI	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (563 aa)
	F6H323_VITVI	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. (1197 aa)

Your Current Organism:

Vitis vinifera

NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D7SYI5_VITVI	D7TBH5_VITVI	D7SYI5	D7TBH5	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	0.629
D7SYI5_VITVI	F6H323_VITVI	D7SYI5	F6H323	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	0.586
D7SYI5_VITVI	F6HFC7_VITVI	D7SYI5	F6HFC7	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	0.483
D7TBF6_VITVI	F6HFC7_VITVI	D7TBF6	F6HFC7	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	0.483
D7TBF6_VITVI	F6HFL7_VITVI	D7TBF6	F6HFL7	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	Uncharacterized protein.	0.617
D7TBH5_VITVI	D7SYI5_VITVI	D7TBH5	D7SYI5	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	0.629
D7TBH5_VITVI	F6GSU3_VITVI	D7TBH5	F6GSU3	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	0.617
D7TBH5_VITVI	F6GTH7_VITVI	D7TBH5	F6GTH7	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	RNA helicase.	0.752
D7TBH5_VITVI	F6H323_VITVI	D7TBH5	F6H323	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	0.657
D7TBH5_VITVI	F6HCA5_VITVI	D7TBH5	F6HCA5	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	RNA helicase.	0.845
D7TBH5_VITVI	F6HFC7_VITVI	D7TBH5	F6HFC7	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	0.611
D7TBH5_VITVI	F6HFC8_VITVI	D7TBH5	F6HFC8	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	0.611
D7TBH5_VITVI	F6HGM8_VITVI	D7TBH5	F6HGM8	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	RNA helicase.	0.818
F6GSU3_VITVI	D7TBH5_VITVI	F6GSU3	D7TBH5	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	0.617
F6GSU3_VITVI	F6GTH7_VITVI	F6GSU3	F6GTH7	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	RNA helicase.	0.656
F6GSU3_VITVI	F6H323_VITVI	F6GSU3	F6H323	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	0.608
F6GSU3_VITVI	F6HCA5_VITVI	F6GSU3	F6HCA5	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	RNA helicase.	0.741
F6GSU3_VITVI	F6HFC7_VITVI	F6GSU3	F6HFC7	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	0.563
F6GSU3_VITVI	F6HFC8_VITVI	F6GSU3	F6HFC8	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	0.564
F6GSU3_VITVI	F6HGM8_VITVI	F6GSU3	F6HGM8	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	RNA helicase.	0.767