(12 nodes) (2023) Illuminating the biosynthesis pathway genes involved in bioactive specific monoterpene glycosides in Paeonia veitchii Lynch by a combination of sequencing platforms. network (Vitis vinifera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6HV95_VITVI	Uncharacterized protein. (551 aa)
	OMT1	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (369 aa)
	D7TCC4_VITVI	Uncharacterized protein. (376 aa)
	D7SKH2_VITVI	Uncharacterized protein. (376 aa)
	GPPS	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (422 aa)
	F6H6F0_VITVI	C2 domain-containing protein. (593 aa)
	F6H6K0_VITVI	Uncharacterized protein. (445 aa)
	F6I5T0_VITVI	Uncharacterized protein; Belongs to the terpene synthase family. (594 aa)
	F6I5S6_VITVI	Uncharacterized protein; Belongs to the terpene synthase family. (566 aa)
	OMT3	O-methyltransferase OMT3; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (353 aa)
	ACT1	Uncharacterized protein. (460 aa)
	CYP82	Uncharacterized protein; Belongs to the cytochrome P450 family. (539 aa)

Your Current Organism:

Vitis vinifera

NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACT1	GPPS	F6I0I5	D7UB76	Uncharacterized protein.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.423
D7SKH2_VITVI	GPPS	D7SKH2	D7UB76	Uncharacterized protein.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.430
D7TCC4_VITVI	GPPS	D7TCC4	D7UB76	Uncharacterized protein.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.430
F6HV95_VITVI	GPPS	F6HV95	D7UB76	Uncharacterized protein.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.892
GPPS	ACT1	D7UB76	F6I0I5	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Uncharacterized protein.	0.423
GPPS	D7SKH2_VITVI	D7UB76	D7SKH2	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Uncharacterized protein.	0.430
GPPS	D7TCC4_VITVI	D7UB76	D7TCC4	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Uncharacterized protein.	0.430
GPPS	F6HV95_VITVI	D7UB76	F6HV95	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Uncharacterized protein.	0.892