(63 nodes) (2023) Physiological and molecular insight of microbial biostimulants for sustainable agriculture. network (Vitis vinifera)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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co-expression

protein homology

Your Input:
	RS	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (392 aa)
	HY5	Basic leucine zipper transcription factor HY5. (169 aa)
	myb15	R2R3 MYB15 transcription factor. (253 aa)
	ACS1	Aminotran_1_2 domain-containing protein. (469 aa)
	PR1	SCP domain-containing protein; Belongs to the CRISP family. (160 aa)
	PAL1	Phenylalanine ammonia-lyase. (717 aa)
	A6XA90_VITVI	Drought responsive element binding protein. (152 aa)
	D7SHU7_VITVI	PABS domain-containing protein; Belongs to the spermidine/spermine synthase family. (374 aa)
	LOXA	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (901 aa)
	GOR	Glutathione reductase; Maintains high levels of reduced glutathione. (559 aa)
	ZEP	Zeaxanthin epoxidase, chloroplastic; Converts zeaxanthin into antheraxanthin and subsequently violaxanthin. (658 aa)
	D7T5I5_VITVI	Aminotran_1_2 domain-containing protein. (506 aa)
	D7TCJ8_VITVI	Phenylalanine ammonia-lyase. (665 aa)
	D7THH7_VITVI	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family. (714 aa)
	D7TNQ7_VITVI	PABS domain-containing protein; Belongs to the spermidine/spermine synthase family. (297 aa)
	D7TNV1_VITVI	FAD_binding_3 domain-containing protein. (475 aa)
	APX	PEROXIDASE_4 domain-containing protein; Belongs to the peroxidase family. (253 aa)
	Gr	Glutathione reductase; Maintains high levels of reduced glutathione. (496 aa)
	D7TV63_VITVI	Aminotran_1_2 domain-containing protein. (481 aa)
	LOXO	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (927 aa)
	SAMDC	Uncharacterized protein. (405 aa)
	F6H071_VITVI	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (953 aa)
	PLDdelta2	Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond. (875 aa)
	F6H168_VITVI	Aminotran_1_2 domain-containing protein. (467 aa)
	PLDalpha3	Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond. (776 aa)
	PVVSPMS	PABS domain-containing protein; Belongs to the spermidine/spermine synthase family. (369 aa)
	F6H8C7_VITVI	Aminotran_1_2 domain-containing protein. (469 aa)
	PLDdelta	Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond. (873 aa)
	F6HDK0_VITVI	S-adenosylmethionine decarboxylase proenzyme. (350 aa)
	F6HEB0_VITVI	Phenylalanine ammonia-lyase. (710 aa)
	F6HEB1_VITVI	Phenylalanine ammonia-lyase. (710 aa)
	F6HEB2_VITVI	Phenylalanine ammonia-lyase. (710 aa)
	F6HEB3_VITVI	Phenylalanine ammonia-lyase. (710 aa)
	PAL	Phenylalanine ammonia-lyase. (710 aa)
	F6HEB8_VITVI	Phenylalanine ammonia-lyase. (710 aa)
	PAL-2	Phenylalanine ammonia-lyase. (710 aa)
	PAL-3	Phenylalanine ammonia-lyase. (734 aa)
	F6HEC2_VITVI	Phenylalanine ammonia-lyase. (710 aa)
	F6HEC3_VITVI	Uncharacterized protein. (558 aa)
	SAMDC-2	S-adenosylmethionine decarboxylase proenzyme. (360 aa)
	F6HGS0_VITVI	Aminotran_1_2 domain-containing protein. (445 aa)
	F6HGU6_VITVI	Phenylalanine ammonia-lyase. (895 aa)
	PLDalpha1	Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond. (818 aa)
	PLDalpha4	Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond. (813 aa)
	CCD4b	Uncharacterized protein. (589 aa)
	CCD4a	Uncharacterized protein. (599 aa)
	NCED2	Uncharacterized protein. (605 aa)
	PAL7	Phenylalanine ammonia-lyase. (723 aa)
	P5CS	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family. (717 aa)
	STS	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (392 aa)
	F6HP39_VITVI	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (392 aa)
	F6HP77_VITVI	GMC_OxRdtase_N domain-containing protein. (560 aa)
	PAL2	Phenylalanine ammonia-lyase. (710 aa)
	NCED1	Uncharacterized protein. (609 aa)
	F6HS12_VITVI	Phenylalanine ammonia-lyase. (469 aa)
	F6HS58_VITVI	Uncharacterized protein. (575 aa)
	PLDbeta1	Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond. (850 aa)
	PLD	Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond. (812 aa)
	PLDepsilon	Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond. (752 aa)
	F6HYN0_VITVI	S-adenosylmethionine decarboxylase proenzyme. (387 aa)
	LOX	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (859 aa)
	F6I2I6_VITVI	Uncharacterized protein. (308 aa)
	STS-3	Stilbene synthase 3; Mediates resistance to pathogens which are sensitive to stilbenes; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (392 aa)

Your Current Organism:

Vitis vinifera

NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACS1	D7SHU7_VITVI	A5BL65	D7SHU7	Aminotran_1_2 domain-containing protein.	PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.	0.663
ACS1	D7TNQ7_VITVI	A5BL65	D7TNQ7	Aminotran_1_2 domain-containing protein.	PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.	0.663
ACS1	F6HDK0_VITVI	A5BL65	F6HDK0	Aminotran_1_2 domain-containing protein.	S-adenosylmethionine decarboxylase proenzyme.	0.746
ACS1	F6HYN0_VITVI	A5BL65	F6HYN0	Aminotran_1_2 domain-containing protein.	S-adenosylmethionine decarboxylase proenzyme.	0.700
ACS1	P5CS	A5BL65	F6HNT7	Aminotran_1_2 domain-containing protein.	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	0.535
ACS1	PVVSPMS	A5BL65	F6H6F3	Aminotran_1_2 domain-containing protein.	PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.	0.664
ACS1	SAMDC	A5BL65	F6GVT0	Aminotran_1_2 domain-containing protein.	Uncharacterized protein.	0.677
ACS1	SAMDC-2	A5BL65	F6HGG6	Aminotran_1_2 domain-containing protein.	S-adenosylmethionine decarboxylase proenzyme.	0.700
APX	GOR	D7TQA5	D7SQK6	PEROXIDASE_4 domain-containing protein; Belongs to the peroxidase family.	Glutathione reductase; Maintains high levels of reduced glutathione.	0.724
APX	Gr	D7TQA5	D7TS92	PEROXIDASE_4 domain-containing protein; Belongs to the peroxidase family.	Glutathione reductase; Maintains high levels of reduced glutathione.	0.813
APX	LOX	D7TQA5	F6HZ10	PEROXIDASE_4 domain-containing protein; Belongs to the peroxidase family.	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	0.626
APX	LOXA	D7TQA5	D7SLA9	PEROXIDASE_4 domain-containing protein; Belongs to the peroxidase family.	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	0.582
APX	LOXO	D7TQA5	D7TZR1	PEROXIDASE_4 domain-containing protein; Belongs to the peroxidase family.	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	0.634
APX	P5CS	D7TQA5	F6HNT7	PEROXIDASE_4 domain-containing protein; Belongs to the peroxidase family.	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	0.478
CCD4a	D7TNV1_VITVI	F6HJ16	D7TNV1	Uncharacterized protein.	FAD_binding_3 domain-containing protein.	0.434
CCD4a	P5CS	F6HJ16	F6HNT7	Uncharacterized protein.	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	0.516
CCD4a	ZEP	F6HJ16	D7SVX6	Uncharacterized protein.	Zeaxanthin epoxidase, chloroplastic; Converts zeaxanthin into antheraxanthin and subsequently violaxanthin.	0.783
CCD4b	D7TNV1_VITVI	F6HJ14	D7TNV1	Uncharacterized protein.	FAD_binding_3 domain-containing protein.	0.433
CCD4b	P5CS	F6HJ14	F6HNT7	Uncharacterized protein.	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	0.528
CCD4b	ZEP	F6HJ14	D7SVX6	Uncharacterized protein.	Zeaxanthin epoxidase, chloroplastic; Converts zeaxanthin into antheraxanthin and subsequently violaxanthin.	0.783