(14 nodes) Actin network (Vitis vinifera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ACT1	Uncharacterized protein. (460 aa)
	D7TCC4_VITVI	Uncharacterized protein. (376 aa)
	D7SKH2_VITVI	Uncharacterized protein. (376 aa)
	D7TLR7_VITVI	Uncharacterized protein; Belongs to the actin family. (725 aa)
	D7UAT8_VITVI	F-box domain-containing protein; Belongs to the actin family. (473 aa)
	F6GVJ5_VITVI	Uncharacterized protein; Belongs to the actin family. (428 aa)
	F6H8I2_VITVI	Uncharacterized protein; Belongs to the actin family. (595 aa)
	F6HJM9_VITVI	Uncharacterized protein. (377 aa)
	D7T325_VITVI	Uncharacterized protein; Belongs to the actin family. (361 aa)
	D7SIW5_VITVI	Uncharacterized protein; Belongs to the actin family. (442 aa)
	D7SVM1_VITVI	Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. (389 aa)
	VITISV_027542	Uncharacterized protein. (377 aa)
	VITISV_040859	Uncharacterized protein. (377 aa)
	D7TC30_VITVI	Uncharacterized protein; Belongs to the actin family. (433 aa)

Your Current Organism:

Vitis vinifera

NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACT1	D7SIW5_VITVI	F6I0I5	D7SIW5	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.696
ACT1	D7SVM1_VITVI	F6I0I5	D7SVM1	Uncharacterized protein.	Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.	0.781
ACT1	D7TLR7_VITVI	F6I0I5	D7TLR7	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.687
ACT1	F6GVJ5_VITVI	F6I0I5	F6GVJ5	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.586
ACT1	F6H8I2_VITVI	F6I0I5	F6H8I2	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.766
D7SIW5_VITVI	ACT1	D7SIW5	F6I0I5	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.696
D7SIW5_VITVI	D7SKH2_VITVI	D7SIW5	D7SKH2	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.699
D7SIW5_VITVI	D7T325_VITVI	D7SIW5	D7T325	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein; Belongs to the actin family.	0.709
D7SIW5_VITVI	D7TC30_VITVI	D7SIW5	D7TC30	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein; Belongs to the actin family.	0.673
D7SIW5_VITVI	D7TCC4_VITVI	D7SIW5	D7TCC4	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.703
D7SIW5_VITVI	D7TLR7_VITVI	D7SIW5	D7TLR7	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein; Belongs to the actin family.	0.957
D7SIW5_VITVI	D7UAT8_VITVI	D7SIW5	D7UAT8	Uncharacterized protein; Belongs to the actin family.	F-box domain-containing protein; Belongs to the actin family.	0.731
D7SIW5_VITVI	F6H8I2_VITVI	D7SIW5	F6H8I2	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein; Belongs to the actin family.	0.970
D7SIW5_VITVI	F6HJM9_VITVI	D7SIW5	F6HJM9	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.688
D7SIW5_VITVI	VITISV_027542	D7SIW5	A5BXV1	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.688
D7SIW5_VITVI	VITISV_040859	D7SIW5	A5B0L2	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.688
D7SKH2_VITVI	D7SIW5_VITVI	D7SKH2	D7SIW5	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.699
D7SKH2_VITVI	D7SVM1_VITVI	D7SKH2	D7SVM1	Uncharacterized protein.	Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.	0.781
D7SKH2_VITVI	D7TLR7_VITVI	D7SKH2	D7TLR7	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.686
D7SKH2_VITVI	F6GVJ5_VITVI	D7SKH2	F6GVJ5	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.581