20 items (Vitis vinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6H3K0_VITVI	Uncharacterized protein. (496 aa)
	F6I4I1_VITVI	G-patch domain-containing protein. (324 aa)
	F6I3A7_VITVI	Uncharacterized protein. (365 aa)
	F6I1J4_VITVI	Uncharacterized protein. (285 aa)
	F6H8P4_VITVI	Retrotrans_gag domain-containing protein. (1291 aa)
	F6HCJ3_VITVI	G-patch domain-containing protein. (140 aa)
	F6HE87_VITVI	G-patch domain-containing protein. (863 aa)
	F6HLK5_VITVI	G-patch domain-containing protein. (263 aa)
	F6HLX4_VITVI	Uncharacterized protein. (383 aa)
	F6HTB7_VITVI	Uncharacterized protein. (1073 aa)
	F6HVS5_VITVI	Uncharacterized protein. (670 aa)
	D7TXX9_VITVI	G-patch domain-containing protein. (123 aa)
	D7SHL9_VITVI	G-patch domain-containing protein. (483 aa)
	D7T2X7_VITVI	Uncharacterized protein. (444 aa)
	D7TV66_VITVI	G-patch domain-containing protein. (370 aa)
	F6HXY8_VITVI	G-patch domain-containing protein. (388 aa)
	F6HWZ4_VITVI	Uncharacterized protein. (576 aa)
	F6GY87_VITVI	Uncharacterized protein. (688 aa)
	F6H858_VITVI	Retrotrans_gag domain-containing protein. (1104 aa)
	F6H6Q9_VITVI	Uncharacterized protein. (397 aa)

Your Current Organism:

Vitis vinifera

NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D7T2X7_VITVI	D7TXX9_VITVI	D7T2X7	D7TXX9	Uncharacterized protein.	G-patch domain-containing protein.	0.493
D7T2X7_VITVI	F6HLX4_VITVI	D7T2X7	F6HLX4	Uncharacterized protein.	Uncharacterized protein.	0.816
D7T2X7_VITVI	F6HTB7_VITVI	D7T2X7	F6HTB7	Uncharacterized protein.	Uncharacterized protein.	0.493
D7TV66_VITVI	D7TXX9_VITVI	D7TV66	D7TXX9	G-patch domain-containing protein.	G-patch domain-containing protein.	0.856
D7TV66_VITVI	F6HLK5_VITVI	D7TV66	F6HLK5	G-patch domain-containing protein.	G-patch domain-containing protein.	0.497
D7TV66_VITVI	F6HTB7_VITVI	D7TV66	F6HTB7	G-patch domain-containing protein.	Uncharacterized protein.	0.856
D7TXX9_VITVI	D7T2X7_VITVI	D7TXX9	D7T2X7	G-patch domain-containing protein.	Uncharacterized protein.	0.493
D7TXX9_VITVI	D7TV66_VITVI	D7TXX9	D7TV66	G-patch domain-containing protein.	G-patch domain-containing protein.	0.856
D7TXX9_VITVI	F6HLX4_VITVI	D7TXX9	F6HLX4	G-patch domain-containing protein.	Uncharacterized protein.	0.454
D7TXX9_VITVI	F6HXY8_VITVI	D7TXX9	F6HXY8	G-patch domain-containing protein.	G-patch domain-containing protein.	0.538
F6HLK5_VITVI	D7TV66_VITVI	F6HLK5	D7TV66	G-patch domain-containing protein.	G-patch domain-containing protein.	0.497
F6HLX4_VITVI	D7T2X7_VITVI	F6HLX4	D7T2X7	Uncharacterized protein.	Uncharacterized protein.	0.816
F6HLX4_VITVI	D7TXX9_VITVI	F6HLX4	D7TXX9	Uncharacterized protein.	G-patch domain-containing protein.	0.454
F6HLX4_VITVI	F6HTB7_VITVI	F6HLX4	F6HTB7	Uncharacterized protein.	Uncharacterized protein.	0.618
F6HTB7_VITVI	D7T2X7_VITVI	F6HTB7	D7T2X7	Uncharacterized protein.	Uncharacterized protein.	0.493
F6HTB7_VITVI	D7TV66_VITVI	F6HTB7	D7TV66	Uncharacterized protein.	G-patch domain-containing protein.	0.856
F6HTB7_VITVI	F6HLX4_VITVI	F6HTB7	F6HLX4	Uncharacterized protein.	Uncharacterized protein.	0.618
F6HTB7_VITVI	F6HXY8_VITVI	F6HTB7	F6HXY8	Uncharacterized protein.	G-patch domain-containing protein.	0.538
F6HXY8_VITVI	D7TXX9_VITVI	F6HXY8	D7TXX9	G-patch domain-containing protein.	G-patch domain-containing protein.	0.538
F6HXY8_VITVI	F6HTB7_VITVI	F6HXY8	F6HTB7	G-patch domain-containing protein.	Uncharacterized protein.	0.538