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VITISV_035185 VITISV_035185 VITISV_041221 VITISV_041221 EIF6 EIF6 VITISV_008353 VITISV_008353 D7SGY7_VITVI D7SGY7_VITVI D7SKN7_VITVI D7SKN7_VITVI D7SKU2_VITVI D7SKU2_VITVI D7SMJ6_VITVI D7SMJ6_VITVI D7SMM8_VITVI D7SMM8_VITVI D7SUQ2_VITVI D7SUQ2_VITVI D7SW77_VITVI D7SW77_VITVI D7SY88_VITVI D7SY88_VITVI D7T1F5_VITVI D7T1F5_VITVI D7T2P0_VITVI D7T2P0_VITVI D7TBW7_VITVI D7TBW7_VITVI D7TF06_VITVI D7TF06_VITVI D7THK7_VITVI D7THK7_VITVI D7TI65_VITVI D7TI65_VITVI D7TQH0_VITVI D7TQH0_VITVI D7TT82_VITVI D7TT82_VITVI D7TTK4_VITVI D7TTK4_VITVI D7TX15_VITVI D7TX15_VITVI D7U2A7_VITVI D7U2A7_VITVI D7U3G4_VITVI D7U3G4_VITVI E0CP43_VITVI E0CP43_VITVI E0CQM1_VITVI E0CQM1_VITVI E0CVR6_VITVI E0CVR6_VITVI F6GSM4_VITVI F6GSM4_VITVI F6GST1_VITVI F6GST1_VITVI F6GTY3_VITVI F6GTY3_VITVI F6GU46_VITVI F6GU46_VITVI F6GVD1_VITVI F6GVD1_VITVI F6GWB9_VITVI F6GWB9_VITVI F6GWW2_VITVI F6GWW2_VITVI F6GXL7_VITVI F6GXL7_VITVI F6H077_VITVI F6H077_VITVI F6H092_VITVI F6H092_VITVI F6H187_VITVI F6H187_VITVI F6H262_VITVI F6H262_VITVI F6H5E9_VITVI F6H5E9_VITVI F6H5X0_VITVI F6H5X0_VITVI F6H6E9_VITVI F6H6E9_VITVI F6H7A3_VITVI F6H7A3_VITVI F6HAE9_VITVI F6HAE9_VITVI F6HBF8_VITVI F6HBF8_VITVI F6HEE2_VITVI F6HEE2_VITVI F6HEH8_VITVI F6HEH8_VITVI F6HG51_VITVI F6HG51_VITVI F6HH82_VITVI F6HH82_VITVI F6HI03_VITVI F6HI03_VITVI F6HKA1_VITVI F6HKA1_VITVI WDR3 WDR3 F6HKV1_VITVI F6HKV1_VITVI F6HLD3_VITVI F6HLD3_VITVI F6HNR9_VITVI F6HNR9_VITVI F6HQ31_VITVI F6HQ31_VITVI F6HSI1_VITVI F6HSI1_VITVI F6HSU8_VITVI F6HSU8_VITVI F6HSZ3_VITVI F6HSZ3_VITVI F6HTW5_VITVI F6HTW5_VITVI F6HUD6_VITVI F6HUD6_VITVI F6HWI5_VITVI F6HWI5_VITVI F6HX89_VITVI F6HX89_VITVI F6HX91_VITVI F6HX91_VITVI F6I0B7_VITVI F6I0B7_VITVI F6I1A7_VITVI F6I1A7_VITVI F6I2S1_VITVI F6I2S1_VITVI F6I3M2_VITVI F6I3M2_VITVI F6I624_VITVI F6I624_VITVI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VITISV_035185Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (157 aa)
VITISV_041221Brix domain-containing protein. (293 aa)
EIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (245 aa)
VITISV_008353Importin N-terminal domain-containing protein. (1076 aa)
D7SGY7_VITVIRIO domain-containing protein. (795 aa)
D7SKN7_VITVIUncharacterized protein. (667 aa)
D7SKU2_VITVIAdenylate kinase isoenzyme 6 homolog; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity; Belongs to the adenylate kinase family. AK6 subfamily. (175 aa)
D7SMJ6_VITVIRRP7 domain-containing protein. (313 aa)
D7SMM8_VITVIS4 RNA-binding domain-containing protein. (182 aa)
D7SUQ2_VITVIGTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (305 aa)
D7SW77_VITVIRNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1032 aa)
D7SY88_VITVIWD_REPEATS_REGION domain-containing protein. (628 aa)
D7T1F5_VITVIExonuclease domain-containing protein. (245 aa)
D7T2P0_VITVIRIO domain-containing protein. (467 aa)
D7TBW7_VITVIGTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (260 aa)
D7TF06_VITVIUncharacterized protein. (271 aa)
D7THK7_VITVIWD_REPEATS_REGION domain-containing protein. (905 aa)
D7TI65_VITVIH/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (188 aa)
D7TQH0_VITVIRibonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. (306 aa)
D7TT82_VITVIProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (424 aa)
D7TTK4_VITVICasein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (266 aa)
D7TX15_VITVIUncharacterized protein. (376 aa)
D7U2A7_VITVIUncharacterized protein. (895 aa)
D7U3G4_VITVICP-type G domain-containing protein. (596 aa)
E0CP43_VITVIProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (333 aa)
E0CQM1_VITVIUncharacterized protein. (358 aa)
E0CVR6_VITVIUncharacterized protein. (652 aa)
F6GSM4_VITVIU3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (533 aa)
F6GST1_VITVINop domain-containing protein. (558 aa)
F6GTY3_VITVIMaoC-like domain-containing protein. (162 aa)
F6GU46_VITVINucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (676 aa)
F6GVD1_VITVICasein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (306 aa)
F6GWB9_VITVIBms1-type G domain-containing protein. (757 aa)
F6GWW2_VITVIUncharacterized protein. (1060 aa)
F6GXL7_VITVIWD_REPEATS_REGION domain-containing protein. (568 aa)
F6H077_VITVI5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (1065 aa)
F6H092_VITVIExonuclease domain-containing protein. (572 aa)
F6H187_VITVIWD_REPEATS_REGION domain-containing protein. (845 aa)
F6H262_VITVINuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. (604 aa)
F6H5E9_VITVIUncharacterized protein. (825 aa)
F6H5X0_VITVIUncharacterized protein. (451 aa)
F6H6E9_VITVIUncharacterized protein. (316 aa)
F6H7A3_VITVIUncharacterized protein. (144 aa)
F6HAE9_VITVICP-type G domain-containing protein. (599 aa)
F6HBF8_VITVINucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (676 aa)
F6HEE2_VITVIWD_REPEATS_REGION domain-containing protein. (900 aa)
F6HEH8_VITVI5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (811 aa)
F6HG51_VITVIUncharacterized protein. (825 aa)
F6HH82_VITVIRibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (130 aa)
F6HI03_VITVI60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (614 aa)
F6HKA1_VITVIUncharacterized protein. (271 aa)
WDR3WD_REPEATS_REGION domain-containing protein. (952 aa)
F6HKV1_VITVI60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (521 aa)
F6HLD3_VITVIPUA domain-containing protein. (586 aa)
F6HNR9_VITVIRibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
F6HQ31_VITVIWD_REPEATS_REGION domain-containing protein. (528 aa)
F6HSI1_VITVIUncharacterized protein. (294 aa)
F6HSU8_VITVIProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (405 aa)
F6HSZ3_VITVIExonuclease domain-containing protein. (349 aa)
F6HTW5_VITVINop domain-containing protein. (573 aa)
F6HUD6_VITVIUncharacterized protein. (633 aa)
F6HWI5_VITVIWD_REPEATS_REGION domain-containing protein. (569 aa)
F6HX89_VITVIGTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (221 aa)
F6HX91_VITVIWD_REPEATS_REGION domain-containing protein. (861 aa)
F6I0B7_VITVITr-type G domain-containing protein. (1030 aa)
F6I1A7_VITVIUncharacterized protein. (953 aa)
F6I2S1_VITVIU3snoRNP10 domain-containing protein. (845 aa)
F6I3M2_VITVIUncharacterized protein. (353 aa)
F6I624_VITVI60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (325 aa)
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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