STRINGSTRING
RS00747 RS00747 PA1080 PA1080 XAC1981 XAC1981 PSPTO193-3 PSPTO193-3 CV1706 CV1706 PSPTO193-4 PSPTO193-4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RS00747Hypothetical FlgF flagellar basal-body rod protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the flagella basal body rod proteins family. (244 aa)
PA1080Hypothetical flagellar hook protein FlgE; Predicted by orpheus program; predicted by glimmer program. (472 aa)
XAC1981Putative polar flagellar FlgG; Predicted by orpheus program; predicted by glimmer program; Belongs to the flagella basal body rod proteins family. (262 aa)
PSPTO193-3Putative flagellar hook protein FlgE; Predicted by orpheus program; predicted by glimmer program. (435 aa)
CV1706Putative FlgG flagellar basal-body rod protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the flagella basal body rod proteins family. (261 aa)
PSPTO193-4Putative flagellar basal-body rod protein FlgF; Predicted by orpheus program; predicted by glimmer program; Belongs to the flagella basal body rod proteins family. (249 aa)
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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