STRINGSTRING
A0A1V6R9N4 A0A1V6R9N4 A0A1V6RBW9 A0A1V6RBW9 A0A1V6RG36 A0A1V6RG36 A0A1V6RG73 A0A1V6RG73 A0A1V6RGY1 A0A1V6RGY1 A0A1V6RML4 A0A1V6RML4 A0A1V6RN86 A0A1V6RN86 A0A1V6RSR1 A0A1V6RSR1 A0A1V6RTK2 A0A1V6RTK2 A0A1V6RVW7 A0A1V6RVW7 A0A1V6RVY3 A0A1V6RVY3 A0A1V6RXM9 A0A1V6RXM9 A0A1V6RZN1 A0A1V6RZN1 A0A1V6S0V3 A0A1V6S0V3 A0A1V6S2A4 A0A1V6S2A4 A0A1V6S2W3 A0A1V6S2W3 A0A1V6S375 A0A1V6S375 A0A1V6S524 A0A1V6S524 A0A1V6S5R3 A0A1V6S5R3 A0A1V6S5U9 A0A1V6S5U9 A0A1V6S6E2 A0A1V6S6E2 A0A1V6S7I8 A0A1V6S7I8 A0A1V6SBS6 A0A1V6SBS6 A0A1V6SC48 A0A1V6SC48 A0A1V6SF93 A0A1V6SF93 A0A1V6SFS2 A0A1V6SFS2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A1V6R9N4Uncharacterized protein. (1021 aa)
A0A1V6RBW9Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
A0A1V6RG36Histone H2A; Belongs to the histone H2A family. (132 aa)
A0A1V6RG73Histone H2B; Belongs to the histone H2B family. (141 aa)
A0A1V6RGY1Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1411 aa)
A0A1V6RML4RPOL9 domain-containing protein. (137 aa)
A0A1V6RN86DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1738 aa)
A0A1V6RSR1Uncharacterized protein. (486 aa)
A0A1V6RTK2Histone domain-containing protein. (171 aa)
A0A1V6RVW7DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1255 aa)
A0A1V6RVY3RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (814 aa)
A0A1V6RXM9Uncharacterized protein. (434 aa)
A0A1V6RZN1Uncharacterized protein. (602 aa)
A0A1V6S0V3RNA_pol_L_2 domain-containing protein. (165 aa)
A0A1V6S2A4TFIIS N-terminal domain-containing protein. (442 aa)
A0A1V6S2W3RPOLD domain-containing protein. (335 aa)
A0A1V6S375Uncharacterized protein. (1206 aa)
A0A1V6S524CDC73_C domain-containing protein. (473 aa)
A0A1V6S5R3Uncharacterized protein. (305 aa)
A0A1V6S5U9RPOL4c domain-containing protein. (148 aa)
A0A1V6S6E2Plus3 domain-containing protein. (611 aa)
A0A1V6S7I8Uncharacterized protein. (77 aa)
A0A1V6SBS6Uncharacterized protein. (143 aa)
A0A1V6SC48Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1030 aa)
A0A1V6SF93Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (120 aa)
A0A1V6SFS2FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (588 aa)
Your Current Organism:
Penicillium vulpinum
NCBI taxonomy Id: 29845
Other names: P. vulpinum, Penicillium claviforme
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