20 items (Penicillium vulpinum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6RSL3	Checkpoint protein; Belongs to the HUS1 family. (343 aa)
	A0A1V6RYG5	Uncharacterized protein. (1033 aa)
	A0A1V6RYP8	Uncharacterized protein. (823 aa)
	A0A1V6S0I3	Uncharacterized protein. (822 aa)
	A0A1V6S2D7	Uncharacterized protein. (249 aa)
	A0A1V6S4E2	Protein kinase domain-containing protein. (531 aa)
	A0A1V6S4M2	Uncharacterized protein. (77 aa)
	A0A1V6S6G1	MRC1 domain-containing protein. (1309 aa)
	A0A1V6S8A8	Histone-lysine N-methyltransferase, H3 lysine-79 specific; Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones. (505 aa)
	A0A1V6S8V5	ERCC4 domain-containing protein. (652 aa)
	A0A1V6S9K8	Serine/threonine-protein kinase Tel1; Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, involved in the regulation of DNA damage response mechanism. Required for the control of telomere length and genome stability; Belongs to the PI3/PI4-kinase family. ATM subfamily. (2894 aa)
	A0A1V6S9W3	Protein kinase domain-containing protein. (354 aa)
	A0A1V6SAH1	ERCC4 domain-containing protein. (589 aa)
	A0A1V6SDG8	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (324 aa)
	A0A1V6SE62	BRCT domain-containing protein. (1425 aa)
	A0A1V6SFG7	Uncharacterized protein. (1578 aa)
	A0A1V6RE64	Uncharacterized protein. (621 aa)
	A0A1V6RHH8	Protein kinase domain-containing protein. (757 aa)
	A0A1V6RN65	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (781 aa)
	A0A1V6RS92	DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation. (444 aa)

Your Current Organism:

Penicillium vulpinum

NCBI taxonomy Id: 29845
Other names: P. vulpinum, Penicillium claviforme

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6RE64	A0A1V6RN65	Uncharacterized protein.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.753
A0A1V6RE64	A0A1V6RS92	Uncharacterized protein.	DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation.	0.577
A0A1V6RE64	A0A1V6RYP8	Uncharacterized protein.	Uncharacterized protein.	0.593
A0A1V6RE64	A0A1V6S0I3	Uncharacterized protein.	Uncharacterized protein.	0.506
A0A1V6RE64	A0A1V6S4E2	Uncharacterized protein.	Protein kinase domain-containing protein.	0.951
A0A1V6RE64	A0A1V6S4M2	Uncharacterized protein.	Uncharacterized protein.	0.608
A0A1V6RE64	A0A1V6S6G1	Uncharacterized protein.	MRC1 domain-containing protein.	0.906
A0A1V6RE64	A0A1V6S9K8	Uncharacterized protein.	Serine/threonine-protein kinase Tel1; Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, involved in the regulation of DNA damage response mechanism. Required for the control of telomere length and genome stability; Belongs to the PI3/PI4-kinase family. ATM subfamily.	0.912
A0A1V6RE64	A0A1V6SAH1	Uncharacterized protein.	ERCC4 domain-containing protein.	0.664
A0A1V6RE64	A0A1V6SE62	Uncharacterized protein.	BRCT domain-containing protein.	0.913
A0A1V6RHH8	A0A1V6RN65	Protein kinase domain-containing protein.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.679
A0A1V6RHH8	A0A1V6RS92	Protein kinase domain-containing protein.	DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation.	0.533
A0A1V6RHH8	A0A1V6RYP8	Protein kinase domain-containing protein.	Uncharacterized protein.	0.537
A0A1V6RHH8	A0A1V6S0I3	Protein kinase domain-containing protein.	Uncharacterized protein.	0.438
A0A1V6RHH8	A0A1V6S4E2	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.781
A0A1V6RHH8	A0A1V6S4M2	Protein kinase domain-containing protein.	Uncharacterized protein.	0.590
A0A1V6RHH8	A0A1V6S6G1	Protein kinase domain-containing protein.	MRC1 domain-containing protein.	0.875
A0A1V6RHH8	A0A1V6S9K8	Protein kinase domain-containing protein.	Serine/threonine-protein kinase Tel1; Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, involved in the regulation of DNA damage response mechanism. Required for the control of telomere length and genome stability; Belongs to the PI3/PI4-kinase family. ATM subfamily.	0.861
A0A1V6RHH8	A0A1V6SAH1	Protein kinase domain-containing protein.	ERCC4 domain-containing protein.	0.648
A0A1V6RHH8	A0A1V6SE62	Protein kinase domain-containing protein.	BRCT domain-containing protein.	0.885