STRINGSTRING
A0A1V6S0H8 A0A1V6S0H8 A0A1V6S4G5 A0A1V6S4G5 A0A1V6S4Y2 A0A1V6S4Y2 A0A1V6S6K3 A0A1V6S6K3 A0A1V6S6Y0 A0A1V6S6Y0 A0A1V6S750 A0A1V6S750 A0A1V6S828 A0A1V6S828 A0A1V6S8U1 A0A1V6S8U1 A0A1V6S9K4 A0A1V6S9K4 A0A1V6SB37 A0A1V6SB37 A0A1V6SB49 A0A1V6SB49 A0A1V6SBK3 A0A1V6SBK3 A0A1V6SC44 A0A1V6SC44 A0A1V6SG70 A0A1V6SG70 A0A1V6SDY4 A0A1V6SDY4 A0A1V6R4M5 A0A1V6R4M5 USB1 USB1 A0A1V6RA82 A0A1V6RA82 A0A1V6RDF8 A0A1V6RDF8 A0A1V6RDP5 A0A1V6RDP5 A0A1V6RDT2 A0A1V6RDT2 A0A1V6REA6 A0A1V6REA6 A0A1V6REK8 A0A1V6REK8 FEN1 FEN1 A0A1V6RKT5 A0A1V6RKT5 A0A1V6RN65 A0A1V6RN65 A0A1V6RRP0 A0A1V6RRP0 A0A1V6RRU5 A0A1V6RRU5 A0A1V6RSB1 A0A1V6RSB1 A0A1V6RSN4 A0A1V6RSN4 A0A1V6RT22 A0A1V6RT22 A0A1V6RT87 A0A1V6RT87 A0A1V6RU94 A0A1V6RU94 A0A1V6RUP7 A0A1V6RUP7 PAN2 PAN2 A0A1V6RVU5 A0A1V6RVU5 A0A1V6RWR3 A0A1V6RWR3 A0A1V6RZY7 A0A1V6RZY7 A0A1V6S0C4 A0A1V6S0C4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A1V6S0H83'-5' exonuclease domain-containing protein. (1247 aa)
A0A1V6S4G5Endo/exonuclease/phosphatase domain-containing protein. (750 aa)
A0A1V6S4Y2C2H2-type domain-containing protein. (733 aa)
A0A1V6S6K3Uncharacterized protein. (734 aa)
A0A1V6S6Y0Uncharacterized protein; Belongs to the RNR ribonuclease family. (1031 aa)
A0A1V6S750Endo/exonuclease/phosphatase domain-containing protein. (624 aa)
A0A1V6S828Exonuclease domain-containing protein. (292 aa)
A0A1V6S8U1F-box domain-containing protein. (301 aa)
A0A1V6S9K4Exonuclease domain-containing protein. (641 aa)
A0A1V6SB37Exonuclease domain-containing protein. (187 aa)
A0A1V6SB49HRDC domain-containing protein. (754 aa)
A0A1V6SBK3DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2227 aa)
A0A1V6SC44Uncharacterized protein. (738 aa)
A0A1V6SG70Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (763 aa)
A0A1V6SDY4Uncharacterized protein. (477 aa)
A0A1V6R4M5Uncharacterized protein. (624 aa)
USB1U6 snRNA phosphodiesterase; Phosphodiesterase responsible for the U6 snRNA 3' end processing. Acts as an exoribonuclease (RNase) responsible for trimming the poly(U) tract of the last nucleotides in the pre-U6 snRNA molecule, leading to the formation of mature U6 snRNA; Belongs to the 2H phosphoesterase superfamily. USB1 family. (295 aa)
A0A1V6RA825'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (1034 aa)
A0A1V6RDF8Uncharacterized protein. (1566 aa)
A0A1V6RDP5DRMBL domain-containing protein. (844 aa)
A0A1V6RDT2Exonuclease domain-containing protein. (240 aa)
A0A1V6REA6C2H2-type domain-containing protein. (622 aa)
A0A1V6REK8Uncharacterized protein. (383 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (395 aa)
A0A1V6RKT55'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. (1391 aa)
A0A1V6RN65Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (781 aa)
A0A1V6RRP0DNA polymerase. (1104 aa)
A0A1V6RRU5Iso_dh domain-containing protein. (900 aa)
A0A1V6RSB1Uncharacterized protein. (554 aa)
A0A1V6RSN4Exonuclease domain-containing protein. (212 aa)
A0A1V6RT22Uncharacterized protein. (261 aa)
A0A1V6RT87zf-C2HE domain-containing protein. (286 aa)
A0A1V6RU94Uncharacterized protein. (1398 aa)
A0A1V6RUP7RNB domain-containing protein. (1374 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] (1170 aa)
A0A1V6RVU5RNB domain-containing protein. (1095 aa)
A0A1V6RWR3Uncharacterized protein. (862 aa)
A0A1V6RZY7POLAc domain-containing protein. (1140 aa)
A0A1V6S0C4Uncharacterized protein. (222 aa)
Your Current Organism:
Penicillium vulpinum
NCBI taxonomy Id: 29845
Other names: P. vulpinum, Penicillium claviforme
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