(13 nodes) poly(A)+ mRNA export from nucleus network (Penicillium vulpinum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6SC70	Uncharacterized protein. (678 aa)
	A0A1V6SD66	PCI domain-containing protein. (453 aa)
	A0A1V6RCK3	SAP domain-containing protein. (298 aa)
	A0A1V6RGY1	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1411 aa)
	A0A1V6RT88	Uncharacterized protein. (1117 aa)
	A0A1V6RTD3	RRM domain-containing protein. (401 aa)
	A0A1V6RTR0	Uncharacterized protein. (614 aa)
	A0A1V6RV18	Uncharacterized protein. (529 aa)
	A0A1V6RXY2	WD_REPEATS_REGION domain-containing protein. (361 aa)
	A0A1V6S164	Uncharacterized protein. (102 aa)
	A0A1V6S2A4	TFIIS N-terminal domain-containing protein. (442 aa)
	A0A1V6S539	Uncharacterized protein. (605 aa)
	A0A1V6S764	Uncharacterized protein; Belongs to the DEAD box helicase family. (488 aa)

Your Current Organism:

Penicillium vulpinum

NCBI taxonomy Id: 29845
Other names: P. vulpinum, Penicillium claviforme

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6RCK3	A0A1V6SC70	SAP domain-containing protein.	Uncharacterized protein.	0.566
A0A1V6RGY1	A0A1V6S2A4	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.	TFIIS N-terminal domain-containing protein.	0.999
A0A1V6RT88	A0A1V6RXY2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.547
A0A1V6RTD3	A0A1V6SC70	RRM domain-containing protein.	Uncharacterized protein.	0.611
A0A1V6RTR0	A0A1V6SC70	Uncharacterized protein.	Uncharacterized protein.	0.560
A0A1V6RV18	A0A1V6RXY2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.976
A0A1V6RV18	A0A1V6S764	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.961
A0A1V6RV18	A0A1V6SC70	Uncharacterized protein.	Uncharacterized protein.	0.878
A0A1V6RXY2	A0A1V6RT88	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.547
A0A1V6RXY2	A0A1V6RV18	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.976
A0A1V6RXY2	A0A1V6S539	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.404
A0A1V6RXY2	A0A1V6S764	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.518
A0A1V6RXY2	A0A1V6SC70	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.992
A0A1V6RXY2	A0A1V6SD66	WD_REPEATS_REGION domain-containing protein.	PCI domain-containing protein.	0.520
A0A1V6S164	A0A1V6SC70	Uncharacterized protein.	Uncharacterized protein.	0.566
A0A1V6S2A4	A0A1V6RGY1	TFIIS N-terminal domain-containing protein.	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.	0.999
A0A1V6S539	A0A1V6RXY2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.404
A0A1V6S539	A0A1V6SC70	Uncharacterized protein.	Uncharacterized protein.	0.654
A0A1V6S764	A0A1V6RV18	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.961
A0A1V6S764	A0A1V6RXY2	Uncharacterized protein; Belongs to the DEAD box helicase family.	WD_REPEATS_REGION domain-containing protein.	0.518