(108 nodes) GTP hydrolysis and joining of the 60S ribosomal subunit network (Penicillium vulpinum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6RS60	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family. (165 aa)
	A0A1V6SB47	Uncharacterized protein. (124 aa)
	A0A1V6SAV4	NAD(P)-bd_dom domain-containing protein. (298 aa)
	A0A1V6SAT9	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (200 aa)
	A0A1V6SAP0	Uncharacterized protein. (149 aa)
	A0A1V6S9X7	Epimerase domain-containing protein. (356 aa)
	A0A1V6S9D2	Uncharacterized protein. (68 aa)
	A0A1V6S866	Uncharacterized protein. (791 aa)
	A0A1V6S7Y8	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (280 aa)
	A0A1V6S6A3	Uncharacterized protein. (676 aa)
	A0A1V6S6A0	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (260 aa)
	A0A1V6S692	Uncharacterized protein. (160 aa)
	A0A1V6S638	S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family. (190 aa)
	A0A1V6S5S5	Uncharacterized protein. (292 aa)
	A0A1V6S5R6	40S ribosomal protein S27. (82 aa)
	A0A1V6S5R5	Ribosomal protein L37; Binds to the 23S rRNA. (120 aa)
	A0A1V6S5M6	Ribosomal_S10 domain-containing protein. (116 aa)
	A0A1V6S5F3	S10_plectin domain-containing protein. (237 aa)
	A0A1V6S5C5	Uncharacterized protein. (109 aa)
	A0A1V6S527	Uncharacterized protein. (402 aa)
	A0A1V6S3S4	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (119 aa)
	A0A1V6S3Q9	Uncharacterized protein. (107 aa)
	A0A1V6S3P1	Uncharacterized protein. (170 aa)
	A0A1V6S3M7	Uncharacterized protein. (202 aa)
	RPS1	40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. (376 aa)
	A0A1V6S3D4	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (135 aa)
	A0A1V6S394	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (108 aa)
	A0A1V6S378	Ribosomal_L23eN domain-containing protein. (149 aa)
	A0A1V6S2V8	Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family. (160 aa)
	A0A1V6S2K6	Uncharacterized protein. (526 aa)
	A0A1V6S2G1	Uncharacterized protein. (301 aa)
	A0A1V6S1Z4	Uncharacterized protein. (353 aa)
	RPS0	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (303 aa)
	A0A1V6S130	Uncharacterized protein. (116 aa)
	A0A1V6RBU0	NAD(P)-bd_dom domain-containing protein. (306 aa)
	A0A1V6RCG3	Epimerase domain-containing protein. (343 aa)
	A0A1V6RDX8	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. (397 aa)
	A0A1V6RF72	Uncharacterized protein. (265 aa)
	A0A1V6RFU1	Epimerase domain-containing protein. (343 aa)
	A0A1V6RH09	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family. (149 aa)
	A0A1V6RKL0	Ribos_L4_asso_C domain-containing protein. (370 aa)
	A0A1V6RMJ9	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. (131 aa)
	A0A1V6RN02	KOW domain-containing protein. (134 aa)
	A0A1V6RNM8	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family. (130 aa)
	A0A1V6RRT9	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (143 aa)
	A0A1V6RS08	Uncharacterized protein. (92 aa)
	A0A1V6RS33	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family. (375 aa)
	A0A1V6RS38	Uncharacterized protein. (131 aa)
	A0A1V6SBW4	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family. (179 aa)
	A0A1V6RSJ0	NAD(P)-bd_dom domain-containing protein. (333 aa)
	A0A1V6RSJ3	KOW domain-containing protein. (148 aa)
	A0A1V6RSP3	Uncharacterized protein. (308 aa)
	A0A1V6RSW5	Epimerase domain-containing protein. (328 aa)
	A0A1V6RSX1	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family. (151 aa)
	A0A1V6RSY2	Uncharacterized protein. (825 aa)
	A0A1V6RSY4	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (65 aa)
	A0A1V6RT01	Uncharacterized protein. (348 aa)
	A0A1V6RTA1	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (217 aa)
	A0A1V6RTA8	Epimerase domain-containing protein. (360 aa)
	A0A1V6RTN5	Ribosomal_L18_c domain-containing protein. (301 aa)
	A0A1V6RUH5	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (155 aa)
	A0A1V6RUI6	Uncharacterized protein. (196 aa)
	A0A1V6RUV1	Uncharacterized protein. (124 aa)
	A0A1V6RUY4	Uncharacterized protein. (197 aa)
	A0A1V6RV23	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (265 aa)
	A0A1V6RV70	Epimerase domain-containing protein. (350 aa)
	A0A1V6RVK3	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (133 aa)
	A0A1V6RWM7	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family. (211 aa)
	A0A1V6RWT5	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (104 aa)
	A0A1V6RWZ4	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (96 aa)
	A0A1V6RX70	Uncharacterized protein. (121 aa)
	A0A1V6RXC1	Uncharacterized protein. (211 aa)
	A0A1V6RXJ8	Epimerase domain-containing protein. (336 aa)
	A0A1V6RXW2	Uncharacterized protein. (158 aa)
	A0A1V6RY35	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (145 aa)
	A0A1V6RY43	Uncharacterized protein. (198 aa)
	A0A1V6RYV8	Uncharacterized protein. (192 aa)
	A0A1V6RZ04	NAD(P)-bd_dom domain-containing protein. (373 aa)
	A0A1V6RZ16	Ribosomal_L28e domain-containing protein. (152 aa)
	A0A1V6RZL7	Uncharacterized protein. (866 aa)
	A0A1V6S079	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. (140 aa)
	A0A1V6SFX1	Ribosomal_L16 domain-containing protein. (225 aa)
	A0A1V6SFF0	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	A0A1V6SF67	Ribosomal_L2_C domain-containing protein. (254 aa)
	A0A1V6SF26	Ribosomal_L7Ae domain-containing protein. (106 aa)
	A0A1V6SE80	Uncharacterized protein. (380 aa)
	A0A1V6SDR0	Tr-type G domain-containing protein. (1044 aa)
	A0A1V6R255	Ribosomal_L18e/L15P domain-containing protein. (184 aa)
	A0A1V6R5H0	S4 RNA-binding domain-containing protein. (453 aa)
	A0A1V6R8H6	Uncharacterized protein. (469 aa)
	A0A1V6R8N1	Epimerase domain-containing protein. (334 aa)
	A0A1V6R8R0	Epimerase domain-containing protein. (341 aa)
	A0A1V6R9H6	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (109 aa)
	A0A1V6R9K2	Uncharacterized protein. (141 aa)
	A0A1V6RAB8	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (172 aa)
	A0A1V6RBL5	Ribosomal_L7Ae domain-containing protein. (265 aa)
	A0A1V6SDE7	Uncharacterized protein. (276 aa)
	A0A1V6SD11	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family. (79 aa)
	A0A1V6SCX9	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (201 aa)
	A0A1V6SCW3	Uncharacterized protein. (250 aa)
	A0A1V6SCT8	Uncharacterized protein. (456 aa)
	A0A1V6SCT3	Ribosomal_L16 domain-containing protein. (221 aa)
	A0A1V6SCR3	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family. (175 aa)
	A0A1V6SCP1	Uncharacterized protein. (134 aa)
	A0A1V6SCH3	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (313 aa)
	A0A1V6SCG6	Epimerase domain-containing protein. (350 aa)
	A0A1V6SCA2	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (621 aa)
	A0A1V6SC80	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (242 aa)

Your Current Organism:

Penicillium vulpinum

NCBI taxonomy Id: 29845
Other names: P. vulpinum, Penicillium claviforme

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1V6R255	A0A1V6R5H0	A0A1V6R255	A0A1V6R5H0	Ribosomal_L18e/L15P domain-containing protein.	S4 RNA-binding domain-containing protein.	0.422
A0A1V6R255	A0A1V6R9H6	A0A1V6R255	A0A1V6R9H6	Ribosomal_L18e/L15P domain-containing protein.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.666
A0A1V6R255	A0A1V6R9K2	A0A1V6R255	A0A1V6R9K2	Ribosomal_L18e/L15P domain-containing protein.	Uncharacterized protein.	0.632
A0A1V6R255	A0A1V6RAB8	A0A1V6R255	A0A1V6RAB8	Ribosomal_L18e/L15P domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.642
A0A1V6R255	A0A1V6RBL5	A0A1V6R255	A0A1V6RBL5	Ribosomal_L18e/L15P domain-containing protein.	Ribosomal_L7Ae domain-containing protein.	0.735
A0A1V6R255	A0A1V6RDX8	A0A1V6R255	A0A1V6RDX8	Ribosomal_L18e/L15P domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	0.808
A0A1V6R255	A0A1V6RF72	A0A1V6R255	A0A1V6RF72	Ribosomal_L18e/L15P domain-containing protein.	Uncharacterized protein.	0.483
A0A1V6R255	A0A1V6RH09	A0A1V6R255	A0A1V6RH09	Ribosomal_L18e/L15P domain-containing protein.	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.	0.486
A0A1V6R255	A0A1V6RKL0	A0A1V6R255	A0A1V6RKL0	Ribosomal_L18e/L15P domain-containing protein.	Ribos_L4_asso_C domain-containing protein.	0.799
A0A1V6R255	A0A1V6RMJ9	A0A1V6R255	A0A1V6RMJ9	Ribosomal_L18e/L15P domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	0.462
A0A1V6R255	A0A1V6RN02	A0A1V6R255	A0A1V6RN02	Ribosomal_L18e/L15P domain-containing protein.	KOW domain-containing protein.	0.806
A0A1V6R255	A0A1V6RNM8	A0A1V6R255	A0A1V6RNM8	Ribosomal_L18e/L15P domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.	0.807
A0A1V6R255	A0A1V6RRT9	A0A1V6R255	A0A1V6RRT9	Ribosomal_L18e/L15P domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.724
A0A1V6R255	A0A1V6RS08	A0A1V6R255	A0A1V6RS08	Ribosomal_L18e/L15P domain-containing protein.	Uncharacterized protein.	0.807
A0A1V6R255	A0A1V6RS33	A0A1V6R255	A0A1V6RS33	Ribosomal_L18e/L15P domain-containing protein.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	0.483
A0A1V6R255	A0A1V6RS38	A0A1V6R255	A0A1V6RS38	Ribosomal_L18e/L15P domain-containing protein.	Uncharacterized protein.	0.520
A0A1V6R255	A0A1V6RS60	A0A1V6R255	A0A1V6RS60	Ribosomal_L18e/L15P domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.	0.581
A0A1V6R255	A0A1V6RSJ3	A0A1V6R255	A0A1V6RSJ3	Ribosomal_L18e/L15P domain-containing protein.	KOW domain-containing protein.	0.833
A0A1V6R255	A0A1V6RSP3	A0A1V6R255	A0A1V6RSP3	Ribosomal_L18e/L15P domain-containing protein.	Uncharacterized protein.	0.483
A0A1V6R255	A0A1V6RSX1	A0A1V6R255	A0A1V6RSX1	Ribosomal_L18e/L15P domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.	0.807