19 items (Penicillium vulpinum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6S2I5	Uncharacterized protein. (449 aa)
	A0A1V6S280	4-hydroxyphenylpyruvate dioxygenase. (404 aa)
	A0A1V6S1W9	Fumarylacetoacetase. (429 aa)
	A0A1V6RWB4	Uncharacterized protein. (535 aa)
	A0A1V6RU21	Aminotran_1_2 domain-containing protein. (403 aa)
	A0A1V6RRF4	Uncharacterized protein. (297 aa)
	A0A1V6RNJ3	Uncharacterized protein. (484 aa)
	A0A1V6RMN6	Uncharacterized protein. (282 aa)
	A0A1V6RK20	Uncharacterized protein. (441 aa)
	A0A1V6RGV6	Uncharacterized protein. (1025 aa)
	A0A1V6RFC4	Uncharacterized protein. (161 aa)
	A0A1V6RDS5	GST C-terminal domain-containing protein. (130 aa)
	A0A1V6RBQ0	ANK_REP_REGION domain-containing protein. (1759 aa)
	A0A1V6S8J8	4-hydroxyphenylpyruvate dioxygenase. (407 aa)
	A0A1V6S891	Uncharacterized protein. (477 aa)
	A0A1V6S762	Aminotran_1_2 domain-containing protein. (473 aa)
	A0A1V6S2T6	Aminotran_1_2 domain-containing protein. (408 aa)
	A0A1V6S681	Amino_oxidase domain-containing protein. (586 aa)
	A0A1V6S2N2	Uncharacterized protein; Belongs to the GST superfamily. (226 aa)

Your Current Organism:

Penicillium vulpinum

NCBI taxonomy Id: 29845
Other names: P. vulpinum, Penicillium claviforme

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6RBQ0	A0A1V6S280	ANK_REP_REGION domain-containing protein.	4-hydroxyphenylpyruvate dioxygenase.	0.569
A0A1V6RBQ0	A0A1V6S8J8	ANK_REP_REGION domain-containing protein.	4-hydroxyphenylpyruvate dioxygenase.	0.569
A0A1V6RDS5	A0A1V6RK20	GST C-terminal domain-containing protein.	Uncharacterized protein.	0.696
A0A1V6RDS5	A0A1V6RNJ3	GST C-terminal domain-containing protein.	Uncharacterized protein.	0.696
A0A1V6RDS5	A0A1V6S1W9	GST C-terminal domain-containing protein.	Fumarylacetoacetase.	0.783
A0A1V6RDS5	A0A1V6S2I5	GST C-terminal domain-containing protein.	Uncharacterized protein.	0.696
A0A1V6RFC4	A0A1V6RK20	Uncharacterized protein.	Uncharacterized protein.	0.607
A0A1V6RFC4	A0A1V6RNJ3	Uncharacterized protein.	Uncharacterized protein.	0.607
A0A1V6RFC4	A0A1V6S280	Uncharacterized protein.	4-hydroxyphenylpyruvate dioxygenase.	0.615
A0A1V6RFC4	A0A1V6S2I5	Uncharacterized protein.	Uncharacterized protein.	0.607
A0A1V6RFC4	A0A1V6S8J8	Uncharacterized protein.	4-hydroxyphenylpyruvate dioxygenase.	0.615
A0A1V6RGV6	A0A1V6S280	Uncharacterized protein.	4-hydroxyphenylpyruvate dioxygenase.	0.569
A0A1V6RGV6	A0A1V6S8J8	Uncharacterized protein.	4-hydroxyphenylpyruvate dioxygenase.	0.569
A0A1V6RK20	A0A1V6RDS5	Uncharacterized protein.	GST C-terminal domain-containing protein.	0.696
A0A1V6RK20	A0A1V6RFC4	Uncharacterized protein.	Uncharacterized protein.	0.607
A0A1V6RK20	A0A1V6RMN6	Uncharacterized protein.	Uncharacterized protein.	0.641
A0A1V6RK20	A0A1V6RNJ3	Uncharacterized protein.	Uncharacterized protein.	0.635
A0A1V6RK20	A0A1V6RRF4	Uncharacterized protein.	Uncharacterized protein.	0.641
A0A1V6RK20	A0A1V6S1W9	Uncharacterized protein.	Fumarylacetoacetase.	0.818
A0A1V6RK20	A0A1V6S280	Uncharacterized protein.	4-hydroxyphenylpyruvate dioxygenase.	0.912