18 items (Penicillium vulpinum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6RS96	Uncharacterized protein. (698 aa)
	A0A1V6RX15	Uncharacterized protein. (584 aa)
	A0A1V6RW77	Uncharacterized protein. (595 aa)
	A0A1V6RRT2	Uncharacterized protein. (307 aa)
	A0A1V6RNL4	Uncharacterized protein. (565 aa)
	A0A1V6RMH4	Uncharacterized protein. (524 aa)
	A0A1V6SCA1	Carrier domain-containing protein. (1018 aa)
	A0A1V6SEF3	Uncharacterized protein. (622 aa)
	A0A1V6SFP8	Uncharacterized protein. (578 aa)
	A0A1V6RIG9	Uncharacterized protein. (2370 aa)
	A0A1V6RGN2	Uncharacterized protein. (543 aa)
	A0A1V6RBK9	Uncharacterized protein. (554 aa)
	A0A1V6R8I7	Uncharacterized protein. (562 aa)
	A0A1V6S8I7	Uncharacterized protein. (601 aa)
	A0A1V6S6W8	Acetyl-coenzyme A synthetase. (670 aa)
	A0A1V6S0U3	Uncharacterized protein. (609 aa)
	A0A1V6S3V8	Uncharacterized protein. (572 aa)
	A0A1V6R7F6	Uncharacterized protein. (550 aa)

Your Current Organism:

Penicillium vulpinum

NCBI taxonomy Id: 29845
Other names: P. vulpinum, Penicillium claviforme

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6R7F6	A0A1V6RIG9	Uncharacterized protein.	Uncharacterized protein.	0.568
A0A1V6R7F6	A0A1V6RS96	Uncharacterized protein.	Uncharacterized protein.	0.621
A0A1V6R7F6	A0A1V6S6W8	Uncharacterized protein.	Acetyl-coenzyme A synthetase.	0.621
A0A1V6R7F6	A0A1V6SCA1	Uncharacterized protein.	Carrier domain-containing protein.	0.568
A0A1V6R8I7	A0A1V6RIG9	Uncharacterized protein.	Uncharacterized protein.	0.568
A0A1V6R8I7	A0A1V6RS96	Uncharacterized protein.	Uncharacterized protein.	0.621
A0A1V6R8I7	A0A1V6S6W8	Uncharacterized protein.	Acetyl-coenzyme A synthetase.	0.621
A0A1V6R8I7	A0A1V6SCA1	Uncharacterized protein.	Carrier domain-containing protein.	0.568
A0A1V6RBK9	A0A1V6RIG9	Uncharacterized protein.	Uncharacterized protein.	0.568
A0A1V6RBK9	A0A1V6RS96	Uncharacterized protein.	Uncharacterized protein.	0.621
A0A1V6RBK9	A0A1V6S6W8	Uncharacterized protein.	Acetyl-coenzyme A synthetase.	0.621
A0A1V6RBK9	A0A1V6SCA1	Uncharacterized protein.	Carrier domain-containing protein.	0.568
A0A1V6RGN2	A0A1V6RIG9	Uncharacterized protein.	Uncharacterized protein.	0.568
A0A1V6RGN2	A0A1V6RS96	Uncharacterized protein.	Uncharacterized protein.	0.621
A0A1V6RGN2	A0A1V6S6W8	Uncharacterized protein.	Acetyl-coenzyme A synthetase.	0.621
A0A1V6RGN2	A0A1V6SCA1	Uncharacterized protein.	Carrier domain-containing protein.	0.568
A0A1V6RIG9	A0A1V6R7F6	Uncharacterized protein.	Uncharacterized protein.	0.568
A0A1V6RIG9	A0A1V6R8I7	Uncharacterized protein.	Uncharacterized protein.	0.568
A0A1V6RIG9	A0A1V6RBK9	Uncharacterized protein.	Uncharacterized protein.	0.568
A0A1V6RIG9	A0A1V6RGN2	Uncharacterized protein.	Uncharacterized protein.	0.568