(29 nodes) Glycosaminoglycan degradation network (Penicillium vulpinum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6RVN2	Uncharacterized protein. (590 aa)
	A0A1V6R8K0	Uncharacterized protein. (667 aa)
	A0A1V6R983	Beta-hexosaminidase. (591 aa)
	A0A1V6RAD2	Uncharacterized protein. (705 aa)
	A0A1V6RAS2	Glyco_hydro_2_C domain-containing protein. (276 aa)
	A0A1V6RBG0	Uncharacterized protein. (347 aa)
	A0A1V6RBQ4	Arylsulfatase; Belongs to the sulfatase family. (590 aa)
	A0A1V6REE2	Uncharacterized protein. (518 aa)
	A0A1V6RF75	Beta-galactosidase. (1010 aa)
	A0A1V6RFY7	Uncharacterized protein. (336 aa)
	A0A1V6RG06	Uncharacterized protein. (157 aa)
	A0A1V6RH62	Uncharacterized protein. (488 aa)
	A0A1V6RL38	Uncharacterized protein. (185 aa)
	A0A1V6RRH4	Beta-galactosidase. (620 aa)
	A0A1V6RU11	Uncharacterized protein. (265 aa)
	A0A1V6RUK7	Glyco_hydro_3 domain-containing protein. (359 aa)
	A0A1V6RWM9	BetaGal_dom2 domain-containing protein. (1028 aa)
	A0A1V6RYQ8	Uncharacterized protein. (421 aa)
	A0A1V6RZE4	Glyco_hydro_3 domain-containing protein. (930 aa)
	A0A1V6RZT4	Uncharacterized protein. (344 aa)
	A0A1V6S0L8	Uncharacterized protein. (194 aa)
	A0A1V6S1U1	Uncharacterized protein. (437 aa)
	A0A1V6S3E9	Uncharacterized protein. (456 aa)
	A0A1V6S7P3	Beta-hexosaminidase. (573 aa)
	A0A1V6S834	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (384 aa)
	A0A1V6S8W4	Sulfatase domain-containing protein. (619 aa)
	A0A1V6SAB5	Beta-galactosidase. (931 aa)
	A0A1V6SAV3	Uncharacterized protein. (852 aa)
	A0A1V6SAY4	Uncharacterized protein. (644 aa)

Your Current Organism:

Penicillium vulpinum

NCBI taxonomy Id: 29845
Other names: P. vulpinum, Penicillium claviforme

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6R8K0	A0A1V6RBQ4	Uncharacterized protein.	Arylsulfatase; Belongs to the sulfatase family.	0.695
A0A1V6R8K0	A0A1V6RF75	Uncharacterized protein.	Beta-galactosidase.	0.457
A0A1V6R8K0	A0A1V6RRH4	Uncharacterized protein.	Beta-galactosidase.	0.457
A0A1V6R8K0	A0A1V6RVN2	Uncharacterized protein.	Uncharacterized protein.	0.587
A0A1V6R8K0	A0A1V6RWM9	Uncharacterized protein.	BetaGal_dom2 domain-containing protein.	0.457
A0A1V6R8K0	A0A1V6S1U1	Uncharacterized protein.	Uncharacterized protein.	0.452
A0A1V6R8K0	A0A1V6SAB5	Uncharacterized protein.	Beta-galactosidase.	0.457
A0A1V6R983	A0A1V6RBQ4	Beta-hexosaminidase.	Arylsulfatase; Belongs to the sulfatase family.	0.835
A0A1V6R983	A0A1V6RF75	Beta-hexosaminidase.	Beta-galactosidase.	0.505
A0A1V6R983	A0A1V6RRH4	Beta-hexosaminidase.	Beta-galactosidase.	0.505
A0A1V6R983	A0A1V6RUK7	Beta-hexosaminidase.	Glyco_hydro_3 domain-containing protein.	0.501
A0A1V6R983	A0A1V6RVN2	Beta-hexosaminidase.	Uncharacterized protein.	0.597
A0A1V6R983	A0A1V6RWM9	Beta-hexosaminidase.	BetaGal_dom2 domain-containing protein.	0.505
A0A1V6R983	A0A1V6RZE4	Beta-hexosaminidase.	Glyco_hydro_3 domain-containing protein.	0.835
A0A1V6R983	A0A1V6S1U1	Beta-hexosaminidase.	Uncharacterized protein.	0.455
A0A1V6R983	A0A1V6SAB5	Beta-hexosaminidase.	Beta-galactosidase.	0.505
A0A1V6R983	A0A1V6SAV3	Beta-hexosaminidase.	Uncharacterized protein.	0.835
A0A1V6RAD2	A0A1V6RBQ4	Uncharacterized protein.	Arylsulfatase; Belongs to the sulfatase family.	0.887
A0A1V6RAD2	A0A1V6RF75	Uncharacterized protein.	Beta-galactosidase.	0.455
A0A1V6RAD2	A0A1V6RRH4	Uncharacterized protein.	Beta-galactosidase.	0.455