STRINGSTRING
ABW09900.1 ABW09900.1 ABW09919.1 ABW09919.1 glyA glyA glyA-2 glyA-2 ABW12564.1 ABW12564.1 ABW12656.1 ABW12656.1 ABW12660.1 ABW12660.1 ABW12695.1 ABW12695.1 ABW14028.1 ABW14028.1 ABW14817.1 ABW14817.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABW09900.1PFAM: glycoside hydrolase family 3 domain protein; KEGG: tpt:Tpet_0848 glycoside hydrolase, family 3 domain protein. (789 aa)
ABW09919.1PFAM: glycoside hydrolase family 3 domain protein; KEGG: rha:RHA1_ro02947 beta-glucosidase. (760 aa)
glyAGlycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (418 aa)
glyA-2Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (420 aa)
ABW12564.1PFAM: glycoside hydrolase family 3 domain protein; KEGG: art:Arth_1839 glycoside hydrolase, family 3 domain protein; Belongs to the glycosyl hydrolase 3 family. (740 aa)
ABW12656.1PFAM: glycoside hydrolase family 3 domain protein; KEGG: art:Arth_3149 beta-glucosidase. (588 aa)
ABW12660.1PFAM: glycoside hydrolase family 1; KEGG: sus:Acid_2768 glycoside hydrolase, family 1; Belongs to the glycosyl hydrolase 1 family. (447 aa)
ABW12695.1PFAM: glycoside hydrolase family 3 domain protein; KEGG: ccr:CC_3054 xylosidase/arabinosidase. (1037 aa)
ABW14028.1PFAM: glycoside hydrolase family 1; KEGG: sus:Acid_2768 glycoside hydrolase, family 1; Belongs to the glycosyl hydrolase 1 family. (413 aa)
ABW14817.1Beta-glucosidase; PFAM: glycoside hydrolase family 1; KEGG: stp:Strop_1560 glycoside hydrolase, family 1. (489 aa)
Your Current Organism:
Frankia sp. EAN1pec
NCBI taxonomy Id: 298653
Other names: F. sp. EAN1pec
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