STRINGSTRING
hmeD hmeD glpX glpX DA2_0227 DA2_0227 DA2_0258 DA2_0258 hybD hybD DA2_0292 DA2_0292 DA2_0340 DA2_0340 DA2_0341 DA2_0341 hdrC hdrC DA2_0355 DA2_0355 hdrA hdrA DA2_0357 DA2_0357 fbp fbp DA2_0466 DA2_0466 gpmI gpmI DA2_0496 DA2_0496 DA2_0605 DA2_0605 DA2_0606 DA2_0606 DA2_0608 DA2_0608 DA2_0749 DA2_0749 pfk6 pfk6 DA2_0984 DA2_0984 DA2_1049 DA2_1049 DA2_1051 DA2_1051 DA2_1391 DA2_1391 DA2_1392 DA2_1392 DA2_1393 DA2_1393 nikR nikR DA2_1627 DA2_1627 gpmA gpmA DA2_1879 DA2_1879 DA2_1881 DA2_1881 DA2_1884 DA2_1884 DA2_1915 DA2_1915 DA2_1918 DA2_1918 DA2_1942 DA2_1942 griI griI acsA acsA DA2_2082 DA2_2082 pta pta DA2_3925 DA2_3925 fba fba acsm4 acsm4 DA2_3752 DA2_3752 glyA glyA DA2_3420 DA2_3420 DA2_3418 DA2_3418 DA2_3308 DA2_3308 DA2_3288 DA2_3288 DA2_3199 DA2_3199 DA2_3109 DA2_3109 DA2_3027 DA2_3027 DA2_3023 DA2_3023 DA2_2984 DA2_2984 DA2_2955 DA2_2955 DA2_2954 DA2_2954 DA2_2887 DA2_2887 DA2_2885 DA2_2885 DA2_2828 DA2_2828 DA2_2825 DA2_2825 DA2_2764 DA2_2764 cooS cooS DA2_2532 DA2_2532 DA2_2282 DA2_2282 DA2_2279 DA2_2279 DA2_2185 DA2_2185 DA2_2142 DA2_2142 ackA ackA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hmeDHdr-like menaquinol oxidoreductase iron-sulfur subunit. (536 aa)
glpXFructose-1,6-bisphosphatase, class II. (327 aa)
DA2_0227D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein. (322 aa)
DA2_0258DRTGG domain protein. (354 aa)
hybDHydrogenase expression/formation protein. (166 aa)
DA2_0292Hydrogenase maturation protease family protein. (159 aa)
DA2_0340Formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1005 aa)
DA2_0341Formate dehydrogenase subunit beta. (235 aa)
hdrCHeterodisulfide reductase, C subunit. (186 aa)
DA2_0355Cysteine-rich domain protein. (326 aa)
hdrAcoB--CoM heterodisulfide reductase iron-sulfur subunit A. (652 aa)
DA2_03574Fe-4S binding domain protein. (494 aa)
fbpFructose-1,6-bisphosphatase, cytosolic; Belongs to the FBPase class 1 family. (337 aa)
DA2_0466PEP-utilizing enzyme, TIM barrel domain protein. (1192 aa)
gpmI2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (552 aa)
DA2_04964Fe-4S binding domain protein. (168 aa)
DA2_0605GXGXG motif family protein. (276 aa)
DA2_0606Glutamine amidotransferases class-II family protein. (369 aa)
DA2_06084Fe-4S binding domain protein; Belongs to the glutamate synthase family. (507 aa)
DA2_0749PEP-utilizing enzyme, mobile domain protein. (1058 aa)
pfk66-phosphofructokinase 6; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP-dependent clade 'X' sub-subfamily. (448 aa)
DA2_0984Hypothetical protein. (432 aa)
DA2_1049Cytoplasmic chaperone TorD family protein. (305 aa)
DA2_1051Dimethyl sulfoxide reductase, chain B. (188 aa)
DA2_1391Formate dehydrogenase subunit beta. (235 aa)
DA2_1392Formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (784 aa)
DA2_1393Tat (twin-arginine translocation) pathway signal sequence domain protein. (191 aa)
nikRnikR DNA-binding transcriptional repressor, Ni-binding protein; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family. (139 aa)
DA2_1627Metalloenzyme superfamily protein. (425 aa)
gpmAPutative phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. (249 aa)
DA2_1879Cytoplasmic chaperone TorD family protein. (262 aa)
DA2_1881Dimethyl sulfoxide reductase, chain B. (185 aa)
DA2_1884Tungsten formylmethanofuran dehydrogenase subunit E. (187 aa)
DA2_1915Tat (twin-arginine translocation) pathway signal sequence domain protein. (575 aa)
DA2_1918Phosphoglycerate mutase family protein. (402 aa)
DA2_1942Aminotransferase class-V family protein. (389 aa)
griI2-amino-4,5-dihydroxy-6-one-heptanoic acid-7-phosphate synthase; Catalyzes a transaldol reaction between 6-deoxy-5- ketofructose 1-phosphate (DKFP) and L-aspartate semialdehyde (ASA) with an elimination of hydroxypyruvaldehyde phosphate to yield 2-amino-3,7- dideoxy-D-threo-hept-6-ulosonate (ADH). Plays a key role in an alternative pathway of the biosynthesis of 3-dehydroquinate (DHQ), which is involved in the canonical pathway for the biosynthesis of aromatic amino acids. (257 aa)
acsAacetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (667 aa)
DA2_2082Enolase, N-terminal domain protein. (236 aa)
ptaPhosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. (704 aa)
DA2_39254Fe-4S binding domain protein. (278 aa)
fbaFructose-1,6-bisphosphate aldolase, class II. (307 aa)
acsm4Acyl-coenzyme A synthetase ACSM4. (557 aa)
DA2_37524Fe-4S binding domain protein. (178 aa)
glyASerine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (412 aa)
DA2_3420Putative membrane protein. (349 aa)
DA2_3418Pyridine nucleotide-disulfide oxidoreductase family protein. (412 aa)
DA2_3308Hypothetical protein. (452 aa)
DA2_3288acetate--CoA ligase. (711 aa)
DA2_3199Phage prohead protease, HK97 family. (233 aa)
DA2_3109Hypothetical protein. (405 aa)
DA2_3027Tat (twin-arginine translocation) pathway signal sequence domain protein. (372 aa)
DA2_3023Cysteine-rich domain protein. (463 aa)
DA2_29844Fe-4S binding domain protein. (445 aa)
DA2_2955Formate dehydrogenase subunit beta. (244 aa)
DA2_2954Formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (803 aa)
DA2_2887Cytoplasmic chaperone TorD family protein. (258 aa)
DA2_28854Fe-4S binding domain protein. (188 aa)
DA2_2828Pyridine nucleotide-disulfide oxidoreductase family protein. (766 aa)
DA2_2825Glutamate synthase (NADPH) GltB1 subunit. (360 aa)
DA2_2764PEP-utilizing enzyme, mobile domain protein. (873 aa)
cooSCarbon-monoxide dehydrogenase, catalytic subunit. (629 aa)
DA2_2532PEP-utilizing enzyme, mobile domain protein. (901 aa)
DA2_2282PEP-utilizing enzyme, mobile domain protein. (916 aa)
DA2_2279PEP-utilizing enzyme, mobile domain protein. (914 aa)
DA2_2185D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein. (301 aa)
DA2_2142DRTGG domain protein. (353 aa)
ackAAcetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (404 aa)
Your Current Organism:
Desulfovibrio sp. A2
NCBI taxonomy Id: 298701
Other names: D. sp. A2
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