(31 nodes) Regulation of mitotic sister chromatid separation network (Drosophila busckii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Dbus_chr3Rg330	Rod. (2158 aa)
	Dbus_chrXg1642	Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family. (782 aa)
	A0A0M5J7I6	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (493 aa)
	Dbus_chr3Rg944	Bub3. (326 aa)
	Dbus_chr2Lg929	Spindly. (650 aa)
	A0A0M5J041	Slik. (1647 aa)
	Dbus_chrXg976	Shtd. (2012 aa)
	A0A0M4F791	Zwilch. (591 aa)
	Dbus_chrXg1373	Apc7. (615 aa)
	Dbus_chr3Lg86	Cdc27. (868 aa)
	Dbus_chr3Lg203	Chro. (935 aa)
	A0A0M4EW16	CG15237. (114 aa)
	A0A0M4EVC7	Sub; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (613 aa)
	Dbus_chrXg1457	Mit-1-15. (705 aa)
	Dbus_chr3Rg530	Ubc-E2H. (180 aa)
	A0A0M4ER04	Ida. (743 aa)
	A0A0M4EQI1	Cv-c. (1887 aa)
	A0A0M4EPP3	Mad2. (207 aa)
	Dbus_chr2Lg772	Ial; Belongs to the protein kinase superfamily. (324 aa)
	Dbus_chr2Lg647	CG31687. (716 aa)
	Dbus_chr3Rg476	Ald. (525 aa)
	Dbus_chrXg1772	Sgg. (1216 aa)
	Dbus_chr3Lg226	Dhc64C. (4669 aa)
	A0A0M4EIL6	Mr; Belongs to the cullin family. (794 aa)
	A0A0M4EFD9	Mad1. (741 aa)
	Dbus_chr2Lg365	Lmg. (85 aa)
	A0A0M4EAM9	Vih; Belongs to the ubiquitin-conjugating enzyme family. (177 aa)
	A0A0M3QY80	Leishmanolysin-like peptidase. (669 aa)
	Dbus_chr3Rg769	Cdc16. (733 aa)
	Dbus_chr2Rg298	BubR1. (1494 aa)
	Dbus_chr2Lg374	Bub1. (1204 aa)

Your Current Organism:

Drosophila busckii

NCBI taxonomy Id: 30019
Other names: D. busckii

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0M4EAM9	A0A0M4EIL6	A0A0M4EAM9	A0A0M4EIL6	Vih; Belongs to the ubiquitin-conjugating enzyme family.	Mr; Belongs to the cullin family.	0.984
A0A0M4EAM9	A0A0M4EPP3	A0A0M4EAM9	A0A0M4EPP3	Vih; Belongs to the ubiquitin-conjugating enzyme family.	Mad2.	0.929
A0A0M4EAM9	A0A0M4ER04	A0A0M4EAM9	A0A0M4ER04	Vih; Belongs to the ubiquitin-conjugating enzyme family.	Ida.	0.982
A0A0M4EAM9	A0A0M4EVC7	A0A0M4EAM9	A0A0M4EVC7	Vih; Belongs to the ubiquitin-conjugating enzyme family.	Sub; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.752
A0A0M4EAM9	A0A0M4EW16	A0A0M4EAM9	A0A0M4EW16	Vih; Belongs to the ubiquitin-conjugating enzyme family.	CG15237.	0.982
A0A0M4EAM9	Dbus_chr2Lg365	A0A0M4EAM9	A0A0M4EE37	Vih; Belongs to the ubiquitin-conjugating enzyme family.	Lmg.	0.671
A0A0M4EAM9	Dbus_chr2Lg374	A0A0M4EAM9	A0A0M3QT54	Vih; Belongs to the ubiquitin-conjugating enzyme family.	Bub1.	0.897
A0A0M4EAM9	Dbus_chr2Lg647	A0A0M4EAM9	A0A0M4EP48	Vih; Belongs to the ubiquitin-conjugating enzyme family.	CG31687.	0.983
A0A0M4EAM9	Dbus_chr2Lg772	A0A0M4EAM9	A0A0M4EPD2	Vih; Belongs to the ubiquitin-conjugating enzyme family.	Ial; Belongs to the protein kinase superfamily.	0.926
A0A0M4EAM9	Dbus_chr2Rg298	A0A0M4EAM9	A0A0M3QUI3	Vih; Belongs to the ubiquitin-conjugating enzyme family.	BubR1.	0.897
A0A0M4EAM9	Dbus_chr3Lg86	A0A0M4EAM9	A0A0M4EXX4	Vih; Belongs to the ubiquitin-conjugating enzyme family.	Cdc27.	0.986
A0A0M4EAM9	Dbus_chr3Rg476	A0A0M4EAM9	A0A0M4EML2	Vih; Belongs to the ubiquitin-conjugating enzyme family.	Ald.	0.904
A0A0M4EAM9	Dbus_chr3Rg530	A0A0M4EAM9	A0A0M4ESU8	Vih; Belongs to the ubiquitin-conjugating enzyme family.	Ubc-E2H.	0.656
A0A0M4EAM9	Dbus_chr3Rg769	A0A0M4EAM9	A0A0M3QXK4	Vih; Belongs to the ubiquitin-conjugating enzyme family.	Cdc16.	0.987
A0A0M4EAM9	Dbus_chr3Rg944	A0A0M4EAM9	A0A0M5J6W0	Vih; Belongs to the ubiquitin-conjugating enzyme family.	Bub3.	0.799
A0A0M4EAM9	Dbus_chrXg1373	A0A0M4EAM9	A0A0M4EZD2	Vih; Belongs to the ubiquitin-conjugating enzyme family.	Apc7.	0.970
A0A0M4EAM9	Dbus_chrXg1642	A0A0M4EAM9	A0A0M5JAX8	Vih; Belongs to the ubiquitin-conjugating enzyme family.	Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family.	0.988
A0A0M4EAM9	Dbus_chrXg976	A0A0M4EAM9	A0A0M4F9X8	Vih; Belongs to the ubiquitin-conjugating enzyme family.	Shtd.	0.973
A0A0M4EFD9	A0A0M4EIL6	A0A0M4EFD9	A0A0M4EIL6	Mad1.	Mr; Belongs to the cullin family.	0.852
A0A0M4EFD9	A0A0M4EPP3	A0A0M4EFD9	A0A0M4EPP3	Mad1.	Mad2.	0.999