19 items (Drosophila busckii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0M4EV86	Ato. (174 aa)
	A0A0M4EVQ0	CtBP; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (498 aa)
	Dbus_chr3Rg512	Rab11. (172 aa)
	A0A0M4F651	Neur. (746 aa)
	Dbus_chrXg680	N. (2676 aa)
	A0A0M5J3Y6	Maker718. (791 aa)
	Dbus_chrXg1469	Lz. (608 aa)
	A0A0M5J740	H. (1000 aa)
	Dbus_chr2Rg745	Phyl. (372 aa)
	Dbus_chr2Lg907	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (782 aa)
	A0A0M4ED70	Su-H. (614 aa)
	A0A0M4EDX3	Nuf. (536 aa)
	A0A0M3QY85	Ato. (307 aa)
	A0A0M3QXZ6	E-spl. (184 aa)
	A0A0M4EEN4	Klu. (791 aa)
	Dbus_chr2Lg865	Uif. (3589 aa)
	Dbus_chr3Lg981	Ocho. (152 aa)
	A0A0M4ELT6	Sens. (537 aa)
	A0A0M4ERM0	Amos. (203 aa)

Your Current Organism:

Drosophila busckii

NCBI taxonomy Id: 30019
Other names: D. busckii

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0M3QXZ6	Dbus_chrXg680	A0A0M3QXZ6	A0A0M5J369	E-spl.	N.	0.863
A0A0M3QY85	A0A0M4ELT6	A0A0M3QY85	A0A0M4ELT6	Ato.	Sens.	0.483
A0A0M4ED70	A0A0M4EVQ0	A0A0M4ED70	A0A0M4EVQ0	Su-H.	CtBP; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.918
A0A0M4ED70	A0A0M5J740	A0A0M4ED70	A0A0M5J740	Su-H.	H.	0.994
A0A0M4ED70	Dbus_chr2Lg865	A0A0M4ED70	A0A0M4EEU7	Su-H.	Uif.	0.763
A0A0M4ED70	Dbus_chrXg1469	A0A0M4ED70	A0A0M3QZL2	Su-H.	Lz.	0.520
A0A0M4ED70	Dbus_chrXg680	A0A0M4ED70	A0A0M5J369	Su-H.	N.	0.992
A0A0M4EDX3	Dbus_chr3Rg512	A0A0M4EDX3	A0A0M4F2R1	Nuf.	Rab11.	0.987
A0A0M4ELT6	A0A0M3QY85	A0A0M4ELT6	A0A0M3QY85	Sens.	Ato.	0.483
A0A0M4ELT6	A0A0M4EV86	A0A0M4ELT6	A0A0M4EV86	Sens.	Ato.	0.483
A0A0M4EV86	A0A0M4ELT6	A0A0M4EV86	A0A0M4ELT6	Ato.	Sens.	0.483
A0A0M4EVQ0	A0A0M4ED70	A0A0M4EVQ0	A0A0M4ED70	CtBP; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Su-H.	0.918
A0A0M4EVQ0	A0A0M5J740	A0A0M4EVQ0	A0A0M5J740	CtBP; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	H.	0.963
A0A0M4EVQ0	Dbus_chrXg1469	A0A0M4EVQ0	A0A0M3QZL2	CtBP; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Lz.	0.650
A0A0M4F651	A0A0M5J740	A0A0M4F651	A0A0M5J740	Neur.	H.	0.852
A0A0M5J740	A0A0M4ED70	A0A0M5J740	A0A0M4ED70	H.	Su-H.	0.994
A0A0M5J740	A0A0M4EVQ0	A0A0M5J740	A0A0M4EVQ0	H.	CtBP; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.963
A0A0M5J740	A0A0M4F651	A0A0M5J740	A0A0M4F651	H.	Neur.	0.852
A0A0M5J740	Dbus_chrXg680	A0A0M5J740	A0A0M5J369	H.	N.	0.835
Dbus_chr2Lg865	A0A0M4ED70	A0A0M4EEU7	A0A0M4ED70	Uif.	Su-H.	0.763