7 items (Drosophila busckii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Dbus_chrXg604	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1681 aa)
	A0A0M5J3Z8	Scat. (951 aa)
	Dbus_chrXg1048	AP-1 complex subunit gamma. (910 aa)
	A0A0M4ER13	AP-47; Belongs to the adaptor complexes medium subunit family. (426 aa)
	A0A0M4EBG0	Gie; Belongs to the small GTPase superfamily. Arf family. (183 aa)
	Dbus_chr2Lg749	Fws. (736 aa)
	A0A0M3QXW3	Pi4KIIalpha. (736 aa)

Your Current Organism:

Drosophila busckii

NCBI taxonomy Id: 30019
Other names: D. busckii

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0M4EBG0	A0A0M5J3Z8	A0A0M4EBG0	A0A0M5J3Z8	Gie; Belongs to the small GTPase superfamily. Arf family.	Scat.	0.674
A0A0M4EBG0	Dbus_chr2Lg749	A0A0M4EBG0	A0A0M4E953	Gie; Belongs to the small GTPase superfamily. Arf family.	Fws.	0.617
A0A0M4EBG0	Dbus_chrXg1048	A0A0M4EBG0	A0A0M4EYT5	Gie; Belongs to the small GTPase superfamily. Arf family.	AP-1 complex subunit gamma.	0.499
A0A0M4EBG0	Dbus_chrXg604	A0A0M4EBG0	A0A0M5J2Y7	Gie; Belongs to the small GTPase superfamily. Arf family.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.588
A0A0M4ER13	Dbus_chrXg1048	A0A0M4ER13	A0A0M4EYT5	AP-47; Belongs to the adaptor complexes medium subunit family.	AP-1 complex subunit gamma.	0.999
A0A0M4ER13	Dbus_chrXg604	A0A0M4ER13	A0A0M5J2Y7	AP-47; Belongs to the adaptor complexes medium subunit family.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.925
A0A0M5J3Z8	A0A0M4EBG0	A0A0M5J3Z8	A0A0M4EBG0	Scat.	Gie; Belongs to the small GTPase superfamily. Arf family.	0.674
A0A0M5J3Z8	Dbus_chr2Lg749	A0A0M5J3Z8	A0A0M4E953	Scat.	Fws.	0.819
Dbus_chr2Lg749	A0A0M4EBG0	A0A0M4E953	A0A0M4EBG0	Fws.	Gie; Belongs to the small GTPase superfamily. Arf family.	0.617
Dbus_chr2Lg749	A0A0M5J3Z8	A0A0M4E953	A0A0M5J3Z8	Fws.	Scat.	0.819
Dbus_chrXg1048	A0A0M4EBG0	A0A0M4EYT5	A0A0M4EBG0	AP-1 complex subunit gamma.	Gie; Belongs to the small GTPase superfamily. Arf family.	0.499
Dbus_chrXg1048	A0A0M4ER13	A0A0M4EYT5	A0A0M4ER13	AP-1 complex subunit gamma.	AP-47; Belongs to the adaptor complexes medium subunit family.	0.999
Dbus_chrXg1048	Dbus_chrXg604	A0A0M4EYT5	A0A0M5J2Y7	AP-1 complex subunit gamma.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.990
Dbus_chrXg604	A0A0M4EBG0	A0A0M5J2Y7	A0A0M4EBG0	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Gie; Belongs to the small GTPase superfamily. Arf family.	0.588
Dbus_chrXg604	A0A0M4ER13	A0A0M5J2Y7	A0A0M4ER13	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	AP-47; Belongs to the adaptor complexes medium subunit family.	0.925
Dbus_chrXg604	Dbus_chrXg1048	A0A0M5J2Y7	A0A0M4EYT5	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	AP-1 complex subunit gamma.	0.990