21 items (Drosophila busckii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0M4ERE8	CG5780. (238 aa)
	A0A0M4EFV9	CG6652. (613 aa)
	Dbus_chrXg1228	Fu. (760 aa)
	Dbus_chr3Lg116	Oseg4. (1211 aa)
	Dbus_chr3Rg229	CG3259. (595 aa)
	Dbus_chr3Lg50	Osm-1. (1732 aa)
	Dbus_chr3Lg608	Oseg1. (1169 aa)
	Dbus_chr3Lg414	CG13074. (452 aa)
	A0A0M5J272	CG5142. (656 aa)
	A0A0M5J591	Dila. (1121 aa)
	Dbus_chr2Lg496	Osm-6. (433 aa)
	A0A0M4EBX0	Btv. (4144 aa)
	A0A0M4EBP6	Oseg6. (1369 aa)
	Dbus_chr2Rg419	Cos; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1180 aa)
	Dbus_chr2Lg549	CG42366. (638 aa)
	Dbus_chr2Rg263	CG30441. (130 aa)
	A0A0M4E4S8	CG3769. (208 aa)
	Dbus_chr2Rg43	Dila. (1121 aa)
	A0A0M4EFU3	CG4525. (581 aa)
	A0A0M4EPZ1	NompB. (851 aa)
	Dbus_chr2Lg930	Che-13. (403 aa)

Your Current Organism:

Drosophila busckii

NCBI taxonomy Id: 30019
Other names: D. busckii

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0M4E4S8	A0A0M4EBP6	A0A0M4E4S8	A0A0M4EBP6	CG3769.	Oseg6.	0.788
A0A0M4E4S8	A0A0M4EBX0	A0A0M4E4S8	A0A0M4EBX0	CG3769.	Btv.	0.761
A0A0M4E4S8	A0A0M4EFU3	A0A0M4E4S8	A0A0M4EFU3	CG3769.	CG4525.	0.795
A0A0M4E4S8	A0A0M4EPZ1	A0A0M4E4S8	A0A0M4EPZ1	CG3769.	NompB.	0.843
A0A0M4E4S8	A0A0M4ERE8	A0A0M4E4S8	A0A0M4ERE8	CG3769.	CG5780.	0.611
A0A0M4E4S8	A0A0M5J272	A0A0M4E4S8	A0A0M5J272	CG3769.	CG5142.	0.751
A0A0M4E4S8	Dbus_chr2Lg496	A0A0M4E4S8	A0A0M5J5S3	CG3769.	Osm-6.	0.795
A0A0M4E4S8	Dbus_chr2Lg549	A0A0M4E4S8	A0A0M4E8S4	CG3769.	CG42366.	0.487
A0A0M4E4S8	Dbus_chr2Lg930	A0A0M4E4S8	A0A0M4EQ60	CG3769.	Che-13.	0.795
A0A0M4E4S8	Dbus_chr2Rg263	A0A0M4E4S8	A0A0M4E7V7	CG3769.	CG30441.	0.750
A0A0M4E4S8	Dbus_chr3Lg116	A0A0M4E4S8	A0A0M4EXE0	CG3769.	Oseg4.	0.784
A0A0M4E4S8	Dbus_chr3Lg414	A0A0M4E4S8	A0A0M5J096	CG3769.	CG13074.	0.980
A0A0M4E4S8	Dbus_chr3Lg50	A0A0M4E4S8	A0A0M4EC07	CG3769.	Osm-1.	0.790
A0A0M4E4S8	Dbus_chr3Lg608	A0A0M4E4S8	A0A0M4F0D9	CG3769.	Oseg1.	0.804
A0A0M4E4S8	Dbus_chr3Rg229	A0A0M4E4S8	A0A0M3QX95	CG3769.	CG3259.	0.790
A0A0M4EBP6	A0A0M4E4S8	A0A0M4EBP6	A0A0M4E4S8	Oseg6.	CG3769.	0.788
A0A0M4EBP6	A0A0M4EBX0	A0A0M4EBP6	A0A0M4EBX0	Oseg6.	Btv.	0.609
A0A0M4EBP6	A0A0M4EFU3	A0A0M4EBP6	A0A0M4EFU3	Oseg6.	CG4525.	0.810
A0A0M4EBP6	A0A0M4EPZ1	A0A0M4EBP6	A0A0M4EPZ1	Oseg6.	NompB.	0.864
A0A0M4EBP6	A0A0M4ERE8	A0A0M4EBP6	A0A0M4ERE8	Oseg6.	CG5780.	0.985