41 items (Drosophila busckii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Dbus_chr2Rg183	RanBPM. (866 aa)
	A0A0M5JA48	Jra. (306 aa)
	Dbus_chr2Lg566	Smt3. (135 aa)
	Dbus_chrXg612	Hep. (850 aa)
	A0A0M5J413	Cni. (144 aa)
	Dbus_chrXg680	N. (2676 aa)
	A0A0M5J009	CG17838. (678 aa)
	Dbus_chrXg531	Slpr. (1174 aa)
	Dbus_chr3Rg720	Ttk. (1044 aa)
	Dbus_chr3Rg250	Slmb. (504 aa)
	A0A0M4EZX6	Mirr. (628 aa)
	Dbus_chr3Lg453	Emc. (194 aa)
	Dbus_chr3Lg153	Armi. (1157 aa)
	Dbus_chrXg820	Phl. (435 aa)
	Dbus_chrXg332	Shi; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (855 aa)
	A0A0M4ESF5	Maker571. (285 aa)
	A0A0M4ES06	Bun. (511 aa)
	A0A0M4EQW5	Gus. (342 aa)
	Dbus_chrXg1814	Kat80. (719 aa)
	Dbus_chr3Rg372	Puc; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (458 aa)
	Dbus_chr2Lg22	Cf2. (419 aa)
	A0A0M4EL81	Rasp; Belongs to the membrane-bound acyltransferase family. (489 aa)
	Dbus_chr3Rg652	Asun. (674 aa)
	Dbus_chrXg1422	Cdc42. (191 aa)
	A0A0M4EJF4	Maker780; Belongs to the membrane-bound acyltransferase family. (301 aa)
	A0A0M4EJ64	Cic. (1784 aa)
	A0A0M4EFY9	Mask. (4027 aa)
	Dbus_chr3Lg256	Phospholipase B-like; Putative phospholipase. (660 aa)
	A0A0M4EEW8	Egfr. (780 aa)
	Dbus_chr3Lg112	Mtl. (192 aa)
	A0A0M4EBR8	Cad74A. (1822 aa)
	A0A0M4EAN8	Klc. (888 aa)
	Dbus_chr2Lg823	S. (611 aa)
	A0A0M4E8K5	Aub; Belongs to the argonaute family. (809 aa)
	A0A0M4E8C5	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (397 aa)
	A0A0M4E793	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (975 aa)
	A0A0M4E657	Cact. (249 aa)
	Dbus_chr2Lg163	Ed. (1294 aa)
	Dbus_chrXg225	Spoon. (612 aa)
	A0A0M3QYN1	CG2183. (151 aa)
	A0A0M3QXS1	Jvl. (1264 aa)

Your Current Organism:

Drosophila busckii

NCBI taxonomy Id: 30019
Other names: D. busckii

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0M3QYN1	A0A0M4E657	A0A0M3QYN1	A0A0M4E657	CG2183.	Cact.	0.473
A0A0M3QYN1	Dbus_chr3Rg250	A0A0M3QYN1	A0A0M4F279	CG2183.	Slmb.	0.521
A0A0M3QYN1	Dbus_chrXg820	A0A0M3QYN1	A0A0M4ETM5	CG2183.	Phl.	0.491
A0A0M4E657	A0A0M3QYN1	A0A0M4E657	A0A0M3QYN1	Cact.	CG2183.	0.473
A0A0M4E657	Dbus_chr3Lg112	A0A0M4E657	A0A0M4EC54	Cact.	Mtl.	0.471
A0A0M4E657	Dbus_chr3Rg250	A0A0M4E657	A0A0M4F279	Cact.	Slmb.	0.896
A0A0M4E657	Dbus_chrXg1422	A0A0M4E657	A0A0M4EJY5	Cact.	Cdc42.	0.476
A0A0M4E657	Dbus_chrXg820	A0A0M4E657	A0A0M4ETM5	Cact.	Phl.	0.684
A0A0M4E793	A0A0M4EAN8	A0A0M4E793	A0A0M4EAN8	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Klc.	0.985
A0A0M4E8C5	A0A0M4EEW8	A0A0M4E8C5	A0A0M4EEW8	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Egfr.	0.505
A0A0M4E8C5	A0A0M4EJ64	A0A0M4E8C5	A0A0M4EJ64	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Cic.	0.880
A0A0M4E8C5	Dbus_chr2Lg22	A0A0M4E8C5	A0A0M4EMX9	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Cf2.	0.869
A0A0M4E8C5	Dbus_chr3Lg112	A0A0M4E8C5	A0A0M4EC54	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Mtl.	0.473
A0A0M4E8C5	Dbus_chr3Rg372	A0A0M4E8C5	A0A0M4ENT2	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Puc; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.602
A0A0M4E8C5	Dbus_chrXg1422	A0A0M4E8C5	A0A0M4EJY5	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Cdc42.	0.473
A0A0M4E8C5	Dbus_chrXg820	A0A0M4E8C5	A0A0M4ETM5	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Phl.	0.943
A0A0M4E8K5	Dbus_chr3Lg153	A0A0M4E8K5	A0A0M4EXG1	Aub; Belongs to the argonaute family.	Armi.	0.755
A0A0M4E8K5	Dbus_chrXg225	A0A0M4E8K5	A0A0M3QYX3	Aub; Belongs to the argonaute family.	Spoon.	0.580
A0A0M4EAN8	A0A0M4E793	A0A0M4EAN8	A0A0M4E793	Klc.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.985
A0A0M4EAN8	Dbus_chr3Lg112	A0A0M4EAN8	A0A0M4EC54	Klc.	Mtl.	0.445