17 items (Drosophila busckii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Dbus_chr3Lg159	Myo61F; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1031 aa)
	A0A0M3QX04	Rpr. (69 aa)
	Dbus_chr2Lg982	Pvr. (1104 aa)
	A0A0M4E9R9	Uvrag. (711 aa)
	Dbus_chr3Rg372	Puc; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (458 aa)
	A0A0M4E338	Rab5. (536 aa)
	A0A0M4EQZ2	Myo31DF; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1010 aa)
	A0A0M3QV90	Vps25. (174 aa)
	Dbus_chrXg80	Fas2. (835 aa)
	Dbus_chrXg612	Hep. (850 aa)
	Dbus_chrXg680	N. (2676 aa)
	A0A0M5J2Z8	CG8964. (408 aa)
	Dbus_chrXg904	Integrin beta; Belongs to the integrin beta chain family. (878 aa)
	Dbus_chrXg531	Slpr. (1174 aa)
	A0A0M4F4T9	Tnc. (2964 aa)
	A0A0M4EWL4	Otk; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1633 aa)
	A0A0M4EWJ3	Scaf. (673 aa)

Your Current Organism:

Drosophila busckii

NCBI taxonomy Id: 30019
Other names: D. busckii

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0M3QV90	A0A0M4E338	A0A0M3QV90	A0A0M4E338	Vps25.	Rab5.	0.487
A0A0M4E338	A0A0M3QV90	A0A0M4E338	A0A0M3QV90	Rab5.	Vps25.	0.487
A0A0M4E338	A0A0M4E9R9	A0A0M4E338	A0A0M4E9R9	Rab5.	Uvrag.	0.687
A0A0M4E9R9	A0A0M4E338	A0A0M4E9R9	A0A0M4E338	Uvrag.	Rab5.	0.687
A0A0M4EQZ2	A0A0M4EWL4	A0A0M4EQZ2	A0A0M4EWL4	Myo31DF; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Otk; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.539
A0A0M4EWJ3	A0A0M4EWL4	A0A0M4EWJ3	A0A0M4EWL4	Scaf.	Otk; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.672
A0A0M4EWL4	A0A0M4EQZ2	A0A0M4EWL4	A0A0M4EQZ2	Otk; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Myo31DF; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.539
A0A0M4EWL4	A0A0M4EWJ3	A0A0M4EWL4	A0A0M4EWJ3	Otk; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Scaf.	0.672
A0A0M4EWL4	Dbus_chr2Lg982	A0A0M4EWL4	A0A0M4EBP0	Otk; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Pvr.	0.545
A0A0M4EWL4	Dbus_chrXg680	A0A0M4EWL4	A0A0M5J369	Otk; Belongs to the protein kinase superfamily. Tyr protein kinase family.	N.	0.641
A0A0M4EWL4	Dbus_chrXg80	A0A0M4EWL4	A0A0M5JA94	Otk; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Fas2.	0.775
A0A0M4EWL4	Dbus_chrXg904	A0A0M4EWL4	A0A0M5J132	Otk; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Integrin beta; Belongs to the integrin beta chain family.	0.894
A0A0M5J2Z8	Dbus_chrXg904	A0A0M5J2Z8	A0A0M5J132	CG8964.	Integrin beta; Belongs to the integrin beta chain family.	0.545
Dbus_chr2Lg982	A0A0M4EWL4	A0A0M4EBP0	A0A0M4EWL4	Pvr.	Otk; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.545
Dbus_chr2Lg982	Dbus_chrXg904	A0A0M4EBP0	A0A0M5J132	Pvr.	Integrin beta; Belongs to the integrin beta chain family.	0.600
Dbus_chr3Rg372	Dbus_chrXg531	A0A0M4ENT2	A0A0M4F8H5	Puc; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Slpr.	0.650
Dbus_chr3Rg372	Dbus_chrXg612	A0A0M4ENT2	A0A0M5J819	Puc; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Hep.	0.896
Dbus_chr3Rg372	Dbus_chrXg904	A0A0M4ENT2	A0A0M5J132	Puc; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Integrin beta; Belongs to the integrin beta chain family.	0.509
Dbus_chrXg531	Dbus_chr3Rg372	A0A0M4F8H5	A0A0M4ENT2	Slpr.	Puc; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.650
Dbus_chrXg531	Dbus_chrXg612	A0A0M4F8H5	A0A0M5J819	Slpr.	Hep.	0.931