58 items (Drosophila busckii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Dbus_chr2Rg202	Rab3. (220 aa)
	A0A0M3QU35	Rab9. (205 aa)
	Dbus_chr2Lg98	RabX6. (223 aa)
	Dbus_chrXg889	RhoGAPp190. (1528 aa)
	Dbus_chrXg1776	CG13375. (325 aa)
	A0A0M5IWP5	CG15399. (268 aa)
	Dbus_chr3Lg352	Ras85D. (184 aa)
	Dbus_chrXg92	CG42541. (1420 aa)
	A0A0M4EW12	Rab2. (213 aa)
	A0A0M4EUW1	CG30158. (248 aa)
	Dbus_chrXg1422	Cdc42. (191 aa)
	A0A0M4EL87	CG8641. (428 aa)
	Dbus_chrXg202	Rab39. (218 aa)
	A0A0M4EM34	Rab8. (207 aa)
	A0A0M4EM95	CG8500. (234 aa)
	A0A0M4EQA6	Rab-RP3. (241 aa)
	Dbus_chrXg96	Rab27. (218 aa)
	A0A0M4ERF3	R. (189 aa)
	Dbus_chrXg1096	Rab40. (252 aa)
	Dbus_chr3Rg692	CG14669. (186 aa)
	Dbus_chrXg1746	Rab-RP4. (185 aa)
	Dbus_chr2Rg754	Rgk2. (735 aa)
	Dbus_chr2Rg874	Ric. (236 aa)
	A0A0M3QVJ1	Rgk1. (486 aa)
	A0A0M3QWI4	Rab26. (586 aa)
	A0A0M3QWM2	CG8519. (207 aa)
	Dbus_chr3Rg709	Mtl. (195 aa)
	A0A0M3QXX2	Rheb. (182 aa)
	A0A0M3QYM8	Rab1. (204 aa)
	A0A0M4F633	RhoL. (185 aa)
	Dbus_chrXg318	Rab35. (202 aa)
	Dbus_chrXg138	Rala. (201 aa)
	Dbus_chrXg1480	Rab21. (224 aa)
	A0A0M5J7G7	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (659 aa)
	Dbus_chrXg1237	Rab10. (205 aa)
	A0A0M5J8A6	Ras64B. (192 aa)
	Dbus_chr3Lg448	RabX6. (211 aa)
	Dbus_chr3Lg486	Rac1. (192 aa)
	Dbus_chr3Rg512	Rab11. (172 aa)
	Dbus_chr3Rg245	Rab23. (280 aa)
	Dbus_chr3Rg682	Rab7. (295 aa)
	A0A0M4F510	RabX4. (213 aa)
	A0A0M4E9R0	Rab2. (215 aa)
	A0A0M4EAR6	RabX5. (281 aa)
	Dbus_chr2Rg431	KappaB-Ras. (209 aa)
	Dbus_chr2Lg973	Rab6. (208 aa)
	A0A0M4EBK5	Rap2l. (176 aa)
	Dbus_chr2Rg631	Rab4. (213 aa)
	Dbus_chr2Rg744	Rho1. (193 aa)
	Dbus_chr3Lg112	Mtl. (192 aa)
	Dbus_chr2Lg902	CG5160. (337 aa)
	A0A0M4EGK7	Ltd. (702 aa)
	Dbus_chrXg272	CG34104. (587 aa)
	Dbus_chr2Rg875	Rho1. (205 aa)
	A0A0M4E5S3	Chrw. (257 aa)
	A0A0M4E338	Rab5. (536 aa)
	Dbus_chrXg1809	Rab9Fb. (209 aa)
	A0A0M3QV99	Rgk3. (484 aa)

Your Current Organism:

Drosophila busckii

NCBI taxonomy Id: 30019
Other names: D. busckii

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0M3QU35	A0A0M3QYM8	A0A0M3QU35	A0A0M3QYM8	Rab9.	Rab1.	0.629
A0A0M3QU35	A0A0M4E338	A0A0M3QU35	A0A0M4E338	Rab9.	Rab5.	0.716
A0A0M3QU35	A0A0M4E5S3	A0A0M3QU35	A0A0M4E5S3	Rab9.	Chrw.	0.696
A0A0M3QU35	A0A0M4E9R0	A0A0M3QU35	A0A0M4E9R0	Rab9.	Rab2.	0.532
A0A0M3QU35	A0A0M4EAR6	A0A0M3QU35	A0A0M4EAR6	Rab9.	RabX5.	0.636
A0A0M3QU35	A0A0M4EM34	A0A0M3QU35	A0A0M4EM34	Rab9.	Rab8.	0.553
A0A0M3QU35	A0A0M4EQA6	A0A0M3QU35	A0A0M4EQA6	Rab9.	Rab-RP3.	0.630
A0A0M3QU35	A0A0M4EW12	A0A0M3QU35	A0A0M4EW12	Rab9.	Rab2.	0.569
A0A0M3QU35	A0A0M4F510	A0A0M3QU35	A0A0M4F510	Rab9.	RabX4.	0.553
A0A0M3QU35	A0A0M4F633	A0A0M3QU35	A0A0M4F633	Rab9.	RhoL.	0.566
A0A0M3QU35	Dbus_chr2Lg973	A0A0M3QU35	A0A0M4E9J8	Rab9.	Rab6.	0.636
A0A0M3QU35	Dbus_chr2Rg631	A0A0M3QU35	A0A0M4EBT2	Rab9.	Rab4.	0.556
A0A0M3QU35	Dbus_chr2Rg744	A0A0M3QU35	A0A0M4EC04	Rab9.	Rho1.	0.535
A0A0M3QU35	Dbus_chr2Rg874	A0A0M3QU35	A0A0M4EUV1	Rab9.	Ric.	0.408
A0A0M3QU35	Dbus_chr2Rg875	A0A0M3QU35	A0A0M4E902	Rab9.	Rho1.	0.535
A0A0M3QU35	Dbus_chr3Lg112	A0A0M3QU35	A0A0M4EC54	Rab9.	Mtl.	0.535
A0A0M3QU35	Dbus_chr3Lg448	A0A0M3QU35	A0A0M4EYK1	Rab9.	RabX6.	0.569
A0A0M3QU35	Dbus_chr3Lg486	A0A0M3QU35	A0A0M4EYM2	Rab9.	Rac1.	0.535
A0A0M3QU35	Dbus_chr3Rg512	A0A0M3QU35	A0A0M4F2R1	Rab9.	Rab11.	0.645
A0A0M3QU35	Dbus_chr3Rg682	A0A0M3QU35	A0A0M4F3T1	Rab9.	Rab7.	0.655