Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| crl | yafA | SDY_0477 | SDY_0478 | Crl; Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes. Stimulates RNA polymerase holoenzyme formation and may bind to several other sigma factors, such as sigma-70 and sigma-32; Belongs to the Crl family. | Conserved hypothetical protein; Displays esterase activity toward pNP-butyrate. | 0.883 |
| kup | yieM | SDY_4001 | SDY_4003 | Low affinity potassium transport system protein; Responsible for the low-affinity transport of potassium into the cell, with the probable concomitant uptake of protons (symport system); Belongs to the HAK/KUP transporter (TC 2.A.72) family. | Conserved hypothetical protein; Code: R; COG: COG2425; orf. | 0.556 |
| kup | yieN | SDY_4001 | SDY_4002 | Low affinity potassium transport system protein; Responsible for the low-affinity transport of potassium into the cell, with the probable concomitant uptake of protons (symport system); Belongs to the HAK/KUP transporter (TC 2.A.72) family. | Putative 2-component regulator; Functions as an ATPase. May play a role in metal insertion (metal-chelatase) or as a chaperone; Belongs to the RavA family. | 0.495 |
| yafA | crl | SDY_0478 | SDY_0477 | Conserved hypothetical protein; Displays esterase activity toward pNP-butyrate. | Crl; Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes. Stimulates RNA polymerase holoenzyme formation and may bind to several other sigma factors, such as sigma-70 and sigma-32; Belongs to the Crl family. | 0.883 |
| yafA | yieM | SDY_0478 | SDY_4003 | Conserved hypothetical protein; Displays esterase activity toward pNP-butyrate. | Conserved hypothetical protein; Code: R; COG: COG2425; orf. | 0.646 |
| yafA | yieN | SDY_0478 | SDY_4002 | Conserved hypothetical protein; Displays esterase activity toward pNP-butyrate. | Putative 2-component regulator; Functions as an ATPase. May play a role in metal insertion (metal-chelatase) or as a chaperone; Belongs to the RavA family. | 0.580 |
| yieM | kup | SDY_4003 | SDY_4001 | Conserved hypothetical protein; Code: R; COG: COG2425; orf. | Low affinity potassium transport system protein; Responsible for the low-affinity transport of potassium into the cell, with the probable concomitant uptake of protons (symport system); Belongs to the HAK/KUP transporter (TC 2.A.72) family. | 0.556 |
| yieM | yafA | SDY_4003 | SDY_0478 | Conserved hypothetical protein; Code: R; COG: COG2425; orf. | Conserved hypothetical protein; Displays esterase activity toward pNP-butyrate. | 0.646 |
| yieM | yieN | SDY_4003 | SDY_4002 | Conserved hypothetical protein; Code: R; COG: COG2425; orf. | Putative 2-component regulator; Functions as an ATPase. May play a role in metal insertion (metal-chelatase) or as a chaperone; Belongs to the RavA family. | 0.989 |
| yieN | kup | SDY_4002 | SDY_4001 | Putative 2-component regulator; Functions as an ATPase. May play a role in metal insertion (metal-chelatase) or as a chaperone; Belongs to the RavA family. | Low affinity potassium transport system protein; Responsible for the low-affinity transport of potassium into the cell, with the probable concomitant uptake of protons (symport system); Belongs to the HAK/KUP transporter (TC 2.A.72) family. | 0.495 |
| yieN | yafA | SDY_4002 | SDY_0478 | Putative 2-component regulator; Functions as an ATPase. May play a role in metal insertion (metal-chelatase) or as a chaperone; Belongs to the RavA family. | Conserved hypothetical protein; Displays esterase activity toward pNP-butyrate. | 0.580 |
| yieN | yieM | SDY_4002 | SDY_4003 | Putative 2-component regulator; Functions as an ATPase. May play a role in metal insertion (metal-chelatase) or as a chaperone; Belongs to the RavA family. | Conserved hypothetical protein; Code: R; COG: COG2425; orf. | 0.989 |