STRINGSTRING
acrR acrR marA marA marR marR soxR soxR soxS soxS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
acrRacrAB operon repressor; Code: K; COG: COG1309. (215 aa)
marAMarA; Multiple antibiotic resistance; transcriptional activator of defense systems; Code: K; COG: COG2207. (129 aa)
marRMarR; Multiple antibiotic resistance protein; repressor of mar operon; Code: K; COG: COG1846. (125 aa)
soxRRedox-sensing activator of soxS; Code: K; COG: COG0789. (154 aa)
soxSRegulation of superoxide response regulon; Code: K; COG: COG2207. (107 aa)
Your Current Organism:
Shigella dysenteriae
NCBI taxonomy Id: 300267
Other names: S. dysenteriae Sd197, Shigella dysenteriae Sd197, Shigella dysenteriae str. Sd197, Shigella dysenteriae strain Sd197
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