STRINGSTRING
SDY_2255 SDY_2255 SDY_2256 SDY_2256 SDY_2257 SDY_2257 SDY_2258 SDY_2258 yegQ yegQ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SDY_2255iso-IS1 ORF2. (71 aa)
SDY_2256iso-IS1 ORF2; Code: L; COG: COG1662. (60 aa)
SDY_2257Conserved hypothetical protein; Code: K; COG: COG3609; orf. (83 aa)
SDY_2258Putative plasmid stabilization protein; Code: R; COG: COG3668. (92 aa)
yegQConserved hypothetical protein; Code: O; COG: COG0826; orf. (453 aa)
Your Current Organism:
Shigella dysenteriae
NCBI taxonomy Id: 300267
Other names: S. dysenteriae Sd197, Shigella dysenteriae Sd197, Shigella dysenteriae str. Sd197, Shigella dysenteriae strain Sd197
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