16 items (Shigella dysenteriae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	yjdH	Putative 2-component sensor protein; Code: T; COG: COG3290. (543 aa)
	rcsC	Sensor for ctr capsule biosynthesis; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB. (933 aa)
	rstB	Sensor histidine protein kinase; RstA regulator; Code: T; COG: COG0642. (433 aa)
	phoQ	Sensor protein PhoQ; Code: T; COG: COG0642. (486 aa)
	baeS	Sensor protein for BaeR; Code: T; COG: COG0642. (467 aa)
	yfhK	Putative 2-component sensor protein; Code: T; COG: COG0642. (496 aa)
	barA	Sensor-regulator; Activates OmpR by phophorylation; Code: T; COG: COG0642. (918 aa)
	cpxA	Histidine protein kinase; Probable sensor protein; acting on arcA; Code: T; COG: COG0642. (457 aa)
	glnL	Histidine protein kinase sensor for GlnG regulator; Nitrogen regulator II, NRII; Code: T; COG: COG3852. (349 aa)
	basS	Sensor protein for basR; Code: T; COG: COG0642. (363 aa)
	SDY_4127	Putative histidine kinase; Code: T; COG: COG0642. (754 aa)
	evgS	Putative sensor for regulator EvgA; Code: ET; COG: COG0834. (1197 aa)
	qseC	Quorum sensing Escherichia coli regulator C; Code: T; COG: COG0642. (449 aa)
	arcB	Aerobic respiration sensor-response protein; Histidine protein kinase/phosphatase, sensor for arcA; Code: T; COG: COG0642. (778 aa)
	envZ	Protein histidine kinase/phosphatase sensor for OmpR; Modulates expression of ompF and ompC; Code: T; COG: COG0642. (450 aa)
	hydH	Sensor kinase for HydG hydrogenase 3 activity; Code: T; COG: COG0642. (458 aa)

Your Current Organism:

Shigella dysenteriae

NCBI taxonomy Id: 300267
Other names: S. dysenteriae Sd197, Shigella dysenteriae Sd197, Shigella dysenteriae str. Sd197, Shigella dysenteriae strain Sd197

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SDY_4127	arcB	SDY_4127	SDY_3391	Putative histidine kinase; Code: T; COG: COG0642.	Aerobic respiration sensor-response protein; Histidine protein kinase/phosphatase, sensor for arcA; Code: T; COG: COG0642.	0.988
SDY_4127	baeS	SDY_4127	SDY_2187	Putative histidine kinase; Code: T; COG: COG0642.	Sensor protein for BaeR; Code: T; COG: COG0642.	0.960
SDY_4127	barA	SDY_4127	SDY_3003	Putative histidine kinase; Code: T; COG: COG0642.	Sensor-regulator; Activates OmpR by phophorylation; Code: T; COG: COG0642.	0.986
SDY_4127	basS	SDY_4127	SDY_4101	Putative histidine kinase; Code: T; COG: COG0642.	Sensor protein for basR; Code: T; COG: COG0642.	0.958
SDY_4127	cpxA	SDY_4127	SDY_3835	Putative histidine kinase; Code: T; COG: COG0642.	Histidine protein kinase; Probable sensor protein; acting on arcA; Code: T; COG: COG0642.	0.952
SDY_4127	envZ	SDY_4127	SDY_3672	Putative histidine kinase; Code: T; COG: COG0642.	Protein histidine kinase/phosphatase sensor for OmpR; Modulates expression of ompF and ompC; Code: T; COG: COG0642.	0.948
SDY_4127	evgS	SDY_4127	SDY_4478	Putative histidine kinase; Code: T; COG: COG0642.	Putative sensor for regulator EvgA; Code: ET; COG: COG0834.	0.983
SDY_4127	glnL	SDY_4127	SDY_3874	Putative histidine kinase; Code: T; COG: COG0642.	Histidine protein kinase sensor for GlnG regulator; Nitrogen regulator II, NRII; Code: T; COG: COG3852.	0.478
SDY_4127	hydH	SDY_4127	SDY_3723	Putative histidine kinase; Code: T; COG: COG0642.	Sensor kinase for HydG hydrogenase 3 activity; Code: T; COG: COG0642.	0.960
SDY_4127	phoQ	SDY_4127	SDY_2023	Putative histidine kinase; Code: T; COG: COG0642.	Sensor protein PhoQ; Code: T; COG: COG0642.	0.948
SDY_4127	qseC	SDY_4127	SDY_3213	Putative histidine kinase; Code: T; COG: COG0642.	Quorum sensing Escherichia coli regulator C; Code: T; COG: COG0642.	0.948
SDY_4127	rcsC	SDY_4127	SDY_0856	Putative histidine kinase; Code: T; COG: COG0642.	Sensor for ctr capsule biosynthesis; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB.	0.969
SDY_4127	rstB	SDY_4127	SDY_1825	Putative histidine kinase; Code: T; COG: COG0642.	Sensor histidine protein kinase; RstA regulator; Code: T; COG: COG0642.	0.959
SDY_4127	yfhK	SDY_4127	SDY_2746	Putative histidine kinase; Code: T; COG: COG0642.	Putative 2-component sensor protein; Code: T; COG: COG0642.	0.948
arcB	SDY_4127	SDY_3391	SDY_4127	Aerobic respiration sensor-response protein; Histidine protein kinase/phosphatase, sensor for arcA; Code: T; COG: COG0642.	Putative histidine kinase; Code: T; COG: COG0642.	0.988
arcB	baeS	SDY_3391	SDY_2187	Aerobic respiration sensor-response protein; Histidine protein kinase/phosphatase, sensor for arcA; Code: T; COG: COG0642.	Sensor protein for BaeR; Code: T; COG: COG0642.	0.939
arcB	barA	SDY_3391	SDY_3003	Aerobic respiration sensor-response protein; Histidine protein kinase/phosphatase, sensor for arcA; Code: T; COG: COG0642.	Sensor-regulator; Activates OmpR by phophorylation; Code: T; COG: COG0642.	0.991
arcB	basS	SDY_3391	SDY_4101	Aerobic respiration sensor-response protein; Histidine protein kinase/phosphatase, sensor for arcA; Code: T; COG: COG0642.	Sensor protein for basR; Code: T; COG: COG0642.	0.932
arcB	cpxA	SDY_3391	SDY_3835	Aerobic respiration sensor-response protein; Histidine protein kinase/phosphatase, sensor for arcA; Code: T; COG: COG0642.	Histidine protein kinase; Probable sensor protein; acting on arcA; Code: T; COG: COG0642.	0.945
arcB	envZ	SDY_3391	SDY_3672	Aerobic respiration sensor-response protein; Histidine protein kinase/phosphatase, sensor for arcA; Code: T; COG: COG0642.	Protein histidine kinase/phosphatase sensor for OmpR; Modulates expression of ompF and ompC; Code: T; COG: COG0642.	0.945