STRINGSTRING
rstB rstB rcsC rcsC yojN yojN narX narX phoQ phoQ baeS baeS narQ narQ yfhK yfhK barA barA qseC qseC arcB arcB envZ envZ hydH hydH cpxA cpxA glnL glnL basS basS SDY_4127 SDY_4127 uhpB uhpB yjdH yjdH evgS evgS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rstBSensor histidine protein kinase; RstA regulator; Code: T; COG: COG0642. (433 aa)
rcsCSensor for ctr capsule biosynthesis; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB. (933 aa)
yojNPutative 2-component sensor protein; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsD is a phosphotransfer intermediate between the sensor kinase RcsC and the response regulator RcsB. It acquires a phosphoryl group from RcsC and transfers it to RcsB. (890 aa)
narXNitrate/nitrate sensor; Histidine protein kinase acts on NarL regulator; Code: T; COG: COG3850. (598 aa)
phoQSensor protein PhoQ; Code: T; COG: COG0642. (486 aa)
baeSSensor protein for BaeR; Code: T; COG: COG0642. (467 aa)
narQSensor for nitrate reductase system; Protein histidine kinase (acts on NarP and narL); Code: T; COG: COG3850. (566 aa)
yfhKPutative 2-component sensor protein; Code: T; COG: COG0642. (496 aa)
barASensor-regulator; Activates OmpR by phophorylation; Code: T; COG: COG0642. (918 aa)
qseCQuorum sensing Escherichia coli regulator C; Code: T; COG: COG0642. (449 aa)
arcBAerobic respiration sensor-response protein; Histidine protein kinase/phosphatase, sensor for arcA; Code: T; COG: COG0642. (778 aa)
envZProtein histidine kinase/phosphatase sensor for OmpR; Modulates expression of ompF and ompC; Code: T; COG: COG0642. (450 aa)
hydHSensor kinase for HydG hydrogenase 3 activity; Code: T; COG: COG0642. (458 aa)
cpxAHistidine protein kinase; Probable sensor protein; acting on arcA; Code: T; COG: COG0642. (457 aa)
glnLHistidine protein kinase sensor for GlnG regulator; Nitrogen regulator II, NRII; Code: T; COG: COG3852. (349 aa)
basSSensor protein for basR; Code: T; COG: COG0642. (363 aa)
SDY_4127Putative histidine kinase; Code: T; COG: COG0642. (754 aa)
uhpBSensor histidine protein kinase phosphorylates UhpA; Code: T; COG: COG3851. (501 aa)
yjdHPutative 2-component sensor protein; Code: T; COG: COG3290. (543 aa)
evgSPutative sensor for regulator EvgA; Code: ET; COG: COG0834. (1197 aa)
Your Current Organism:
Shigella dysenteriae
NCBI taxonomy Id: 300267
Other names: S. dysenteriae Sd197, Shigella dysenteriae Sd197, Shigella dysenteriae str. Sd197, Shigella dysenteriae strain Sd197
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