Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CUM77099.1 | CUM77241.1 | ERS852420_00564 | ERS852420_00572 | Uncharacterized radical SAM protein YgiQ. | Radical SAM family uncharacterized protein. | 0.421 |
| CUM77099.1 | CUM77254.1 | ERS852420_00564 | ERS852420_00573 | Uncharacterized radical SAM protein YgiQ. | Uncharacterized protein conserved in bacteria. | 0.519 |
| CUM77099.1 | pepD_2 | ERS852420_00564 | ERS852420_00562 | Uncharacterized radical SAM protein YgiQ. | Cytosol non-specific dipeptidase. | 0.792 |
| CUM77099.1 | recU | ERS852420_00564 | ERS852420_00566 | Uncharacterized radical SAM protein YgiQ. | Holliday junction resolvase recU; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family. | 0.848 |
| CUM77099.1 | rluD_1 | ERS852420_00564 | ERS852420_00565 | Uncharacterized radical SAM protein YgiQ. | Ribosomal large subunit pseudouridine synthase D; Belongs to the pseudouridine synthase RluA family. | 0.849 |
| CUM77099.1 | rsuA | ERS852420_00564 | ERS852420_00563 | Uncharacterized radical SAM protein YgiQ. | Ribosomal small subunit pseudouridine synthase A; Belongs to the pseudouridine synthase RsuA family. | 0.848 |
| CUM77241.1 | CUM77099.1 | ERS852420_00572 | ERS852420_00564 | Radical SAM family uncharacterized protein. | Uncharacterized radical SAM protein YgiQ. | 0.421 |
| CUM77241.1 | CUM77254.1 | ERS852420_00572 | ERS852420_00573 | Radical SAM family uncharacterized protein. | Uncharacterized protein conserved in bacteria. | 0.987 |
| CUM77241.1 | CUM77294.1 | ERS852420_00572 | ERS852420_00576 | Radical SAM family uncharacterized protein. | Predicted ribosomal protein. | 0.773 |
| CUM77241.1 | CUM77353.1 | ERS852420_00572 | ERS852420_00581 | Radical SAM family uncharacterized protein. | Putative nicotinate-nucleotide adenylyltransferase. | 0.529 |
| CUM77241.1 | nadD | ERS852420_00572 | ERS852420_00580 | Radical SAM family uncharacterized protein. | Probable nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.543 |
| CUM77241.1 | obg | ERS852420_00572 | ERS852420_00578 | Radical SAM family uncharacterized protein. | Spo0B-associated GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.560 |
| CUM77241.1 | pepD_2 | ERS852420_00572 | ERS852420_00562 | Radical SAM family uncharacterized protein. | Cytosol non-specific dipeptidase. | 0.410 |
| CUM77241.1 | recU | ERS852420_00572 | ERS852420_00566 | Radical SAM family uncharacterized protein. | Holliday junction resolvase recU; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family. | 0.488 |
| CUM77241.1 | rluD_1 | ERS852420_00572 | ERS852420_00565 | Radical SAM family uncharacterized protein. | Ribosomal large subunit pseudouridine synthase D; Belongs to the pseudouridine synthase RluA family. | 0.479 |
| CUM77241.1 | rsuA | ERS852420_00572 | ERS852420_00563 | Radical SAM family uncharacterized protein. | Ribosomal small subunit pseudouridine synthase A; Belongs to the pseudouridine synthase RsuA family. | 0.429 |
| CUM77241.1 | ybeB | ERS852420_00572 | ERS852420_00582 | Radical SAM family uncharacterized protein. | Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.427 |
| CUM77241.1 | yhbY | ERS852420_00572 | ERS852420_00579 | Radical SAM family uncharacterized protein. | RNA-binding protein YhbY. | 0.543 |
| CUM77254.1 | CUM77099.1 | ERS852420_00573 | ERS852420_00564 | Uncharacterized protein conserved in bacteria. | Uncharacterized radical SAM protein YgiQ. | 0.519 |
| CUM77254.1 | CUM77241.1 | ERS852420_00573 | ERS852420_00572 | Uncharacterized protein conserved in bacteria. | Radical SAM family uncharacterized protein. | 0.987 |
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