(10 nodes) Fibrinogen, and Thrombin light chain network (Pundamilia nyererei)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	serpinc1	Serpin peptidase inhibitor, clade C (antithrombin), member 1; Belongs to the serpin family. (447 aa)
	fgb	Fibrinogen beta chain. (449 aa)
	ENSPNYP00000007349	Uncharacterized protein. (464 aa)
	ENSPNYP00000007375	Fibrinogen C-terminal domain-containing protein. (262 aa)
	serpind1	Serpin peptidase inhibitor, clade D (heparin cofactor), member 1; Belongs to the serpin family. (504 aa)
	ENSPNYP00000016877	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (230 aa)
	fgg	Fibrinogen gamma chain. (431 aa)
	LOC102207201	Uncharacterized protein; Belongs to the peptidase S1 family. (440 aa)
	LOC102200345	Coagulation factor II (thrombin); Belongs to the peptidase S1 family. (611 aa)
	LOC102209932	SERPIN domain-containing protein; Belongs to the serpin family. (114 aa)

Your Current Organism:

Pundamilia nyererei

NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPNYP00000007349	ENSPNYP00000016877	ENSPNYP00000007349	ENSPNYP00000016877	Uncharacterized protein.	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.	0.816
ENSPNYP00000007349	LOC102200345	ENSPNYP00000007349	ENSPNYP00000027585	Uncharacterized protein.	Coagulation factor II (thrombin); Belongs to the peptidase S1 family.	0.993
ENSPNYP00000007349	LOC102207201	ENSPNYP00000007349	ENSPNYP00000027446	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase S1 family.	0.993
ENSPNYP00000007349	LOC102209932	ENSPNYP00000007349	ENSPNYP00000031876	Uncharacterized protein.	SERPIN domain-containing protein; Belongs to the serpin family.	0.909
ENSPNYP00000007349	fgb	ENSPNYP00000007349	ENSPNYP00000007337	Uncharacterized protein.	Fibrinogen beta chain.	0.999
ENSPNYP00000007349	fgg	ENSPNYP00000007349	ENSPNYP00000018213	Uncharacterized protein.	Fibrinogen gamma chain.	0.999
ENSPNYP00000007349	serpinc1	ENSPNYP00000007349	ENSPNYP00000006414	Uncharacterized protein.	Serpin peptidase inhibitor, clade C (antithrombin), member 1; Belongs to the serpin family.	0.909
ENSPNYP00000007349	serpind1	ENSPNYP00000007349	ENSPNYP00000009975	Uncharacterized protein.	Serpin peptidase inhibitor, clade D (heparin cofactor), member 1; Belongs to the serpin family.	0.846
ENSPNYP00000007375	ENSPNYP00000016877	ENSPNYP00000007375	ENSPNYP00000016877	Fibrinogen C-terminal domain-containing protein.	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.	0.816
ENSPNYP00000007375	LOC102200345	ENSPNYP00000007375	ENSPNYP00000027585	Fibrinogen C-terminal domain-containing protein.	Coagulation factor II (thrombin); Belongs to the peptidase S1 family.	0.993
ENSPNYP00000007375	LOC102207201	ENSPNYP00000007375	ENSPNYP00000027446	Fibrinogen C-terminal domain-containing protein.	Uncharacterized protein; Belongs to the peptidase S1 family.	0.993
ENSPNYP00000007375	LOC102209932	ENSPNYP00000007375	ENSPNYP00000031876	Fibrinogen C-terminal domain-containing protein.	SERPIN domain-containing protein; Belongs to the serpin family.	0.909
ENSPNYP00000007375	fgb	ENSPNYP00000007375	ENSPNYP00000007337	Fibrinogen C-terminal domain-containing protein.	Fibrinogen beta chain.	0.998
ENSPNYP00000007375	fgg	ENSPNYP00000007375	ENSPNYP00000018213	Fibrinogen C-terminal domain-containing protein.	Fibrinogen gamma chain.	0.998
ENSPNYP00000007375	serpinc1	ENSPNYP00000007375	ENSPNYP00000006414	Fibrinogen C-terminal domain-containing protein.	Serpin peptidase inhibitor, clade C (antithrombin), member 1; Belongs to the serpin family.	0.909
ENSPNYP00000007375	serpind1	ENSPNYP00000007375	ENSPNYP00000009975	Fibrinogen C-terminal domain-containing protein.	Serpin peptidase inhibitor, clade D (heparin cofactor), member 1; Belongs to the serpin family.	0.846
ENSPNYP00000016877	ENSPNYP00000007349	ENSPNYP00000016877	ENSPNYP00000007349	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.	Uncharacterized protein.	0.816
ENSPNYP00000016877	ENSPNYP00000007375	ENSPNYP00000016877	ENSPNYP00000007375	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.	Fibrinogen C-terminal domain-containing protein.	0.816
ENSPNYP00000016877	LOC102200345	ENSPNYP00000016877	ENSPNYP00000027585	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.	Coagulation factor II (thrombin); Belongs to the peptidase S1 family.	0.900
ENSPNYP00000016877	LOC102207201	ENSPNYP00000016877	ENSPNYP00000027446	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.	Uncharacterized protein; Belongs to the peptidase S1 family.	0.900