STRINGSTRING
utp6 utp6 mphosph10 mphosph10 wdr3 wdr3 utp15 utp15 bysl bysl nop14 nop14 LOC102195041 LOC102195041 wdr46 wdr46 utp20 utp20 wdr36 wdr36 wdr75 wdr75 utp4 utp4 tbl3 tbl3 ENSPNYP00000023311 ENSPNYP00000023311 bms1 bms1 rrp7a rrp7a nol6 nol6 nat10 nat10 UTP14C UTP14C wdr43 wdr43
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
utp6UTP6 small subunit processome component. (595 aa)
mphosph10U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family. (679 aa)
wdr3WD repeat domain 3. (911 aa)
utp15UTP15 small subunit processome component. (528 aa)
byslBystin-like. (435 aa)
nop14NOP14 nucleolar protein homolog (yeast). (862 aa)
LOC102195041PWP2 small subunit processome component. (723 aa)
wdr46WD repeat domain 46. (597 aa)
utp20UTP20 small subunit processome component. (2794 aa)
wdr36WD repeat domain 36. (889 aa)
wdr75WD repeat domain 75. (837 aa)
utp4UTP4 small subunit processome component. (684 aa)
tbl3Transducin (beta)-like 3. (750 aa)
ENSPNYP00000023311UTP18 small subunit processome component. (101 aa)
bms1BMS1 ribosome biogenesis factor. (1208 aa)
rrp7aRibosomal RNA processing 7 homolog A. (282 aa)
nol6Nucleolar protein 6. (1138 aa)
nat10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1035 aa)
UTP14CUTP14C small subunit processome component. (775 aa)
wdr43WD repeat domain 43. (650 aa)
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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