STRINGSTRING
slu7 slu7 dhx8 dhx8 DDX39A DDX39A dhx35 dhx35 crnkl1 crnkl1 prpf18 prpf18 ENSPNYP00000005329 ENSPNYP00000005329 syf2 syf2 ENSPNYP00000008031 ENSPNYP00000008031 cactin cactin dhx34 dhx34 nkap nkap cwc22 cwc22 cdc40 cdc40 yju2 yju2 shd shd dhx38 dhx38 xab2 xab2 sde2 sde2 ENSPNYP00000022113 ENSPNYP00000022113 prkrip1 prkrip1 fam32a fam32a ENSPNYP00000031633 ENSPNYP00000031633 ENSPNYP00000031925 ENSPNYP00000031925
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
slu7SLU7 homolog, splicing factor. (566 aa)
dhx8DEAH (Asp-Glu-Ala-His) box polypeptide 8. (1213 aa)
DDX39ADExD-box helicase 39A. (439 aa)
dhx35DEAH-box helicase 35. (699 aa)
crnkl1Crooked neck pre-mRNA splicing factor 1. (755 aa)
prpf18PRP18 pre-mRNA processing factor 18 homolog (yeast). (350 aa)
ENSPNYP00000005329Slu7 domain-containing protein. (228 aa)
syf2SYF2 pre-mRNA-splicing factor. (238 aa)
ENSPNYP00000008031Cir_N domain-containing protein. (67 aa)
cactinCactin. (731 aa)
dhx34DEAH (Asp-Glu-Ala-His) box polypeptide 34. (1135 aa)
nkapNFKB activating protein. (412 aa)
cwc22CWC22 spliceosome associated protein homolog. (687 aa)
cdc40Cell division cycle 40 homolog (S. cerevisiae). (581 aa)
yju2YJU2 splicing factor homolog. (340 aa)
shdSrc homology 2 domain containing transforming protein D, a. (406 aa)
dhx38DEAH (Asp-Glu-Ala-His) box polypeptide 38. (1242 aa)
xab2XPA binding protein 2. (849 aa)
sde2SDE2 telomere maintenance homolog (S. pombe). (365 aa)
ENSPNYP00000022113Si:zfos-375h5.1. (200 aa)
prkrip1PRKR interacting protein 1. (193 aa)
fam32aFamily with sequence similarity 32 member A. (113 aa)
ENSPNYP00000031633Cir_N domain-containing protein. (125 aa)
ENSPNYP00000031925Slu7 domain-containing protein. (505 aa)
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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