STRINGSTRING
crnkl1 crnkl1 syf2 syf2 cwc22 cwc22 cdc40 cdc40 yju2 yju2 dhx38 dhx38 xab2 xab2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
crnkl1Crooked neck pre-mRNA splicing factor 1. (755 aa)
syf2SYF2 pre-mRNA-splicing factor. (238 aa)
cwc22CWC22 spliceosome associated protein homolog. (687 aa)
cdc40Cell division cycle 40 homolog (S. cerevisiae). (581 aa)
yju2YJU2 splicing factor homolog. (340 aa)
dhx38DEAH (Asp-Glu-Ala-His) box polypeptide 38. (1242 aa)
xab2XPA binding protein 2. (849 aa)
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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