STRINGSTRING
ubxn2a ubxn2a aspscr1 aspscr1 LOC102198640 LOC102198640 ufd1 ufd1 spata5l1 spata5l1 nsfl1c nsfl1c ubxn7 ubxn7 UBXN4 UBXN4 vcpip1 vcpip1 vcp vcp ubxn6 ubxn6 svip svip nploc4 nploc4 faf1 faf1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ubxn2aUBX domain protein 2A. (249 aa)
aspscr1ASPSCR1 tether for SLC2A4, UBX domain containing. (603 aa)
LOC102198640Zgc:136908; Belongs to the AAA ATPase family. (806 aa)
ufd1Ubiquitin recognition factor in ER associated degradation 1. (310 aa)
spata5l1Spermatogenesis associated 5-like 1. (734 aa)
nsfl1cNSFL1 (p97) cofactor (p47). (374 aa)
ubxn7UBX domain protein 7. (540 aa)
UBXN4UBX domain protein 4. (471 aa)
vcpip1Valosin containing protein (p97)/p47 complex interacting protein 1. (1182 aa)
vcpValosin containing protein; Belongs to the AAA ATPase family. (806 aa)
ubxn6UBX domain protein 6. (439 aa)
svipSi:ch73-147o17.1. (81 aa)
nploc4NPL4 homolog, ubiquitin recognition factor. (624 aa)
faf1Fas (TNFRSF6) associated factor 1. (676 aa)
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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